Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0875
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.1  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 574 ISYKFTYFFD*QSIYC*FYMVHPVKYYLTS 485
           I   FTY+    +I+  F+ V P+K + TS
Sbjct: 148 IGRSFTYYVCNTTIFLIFHSVLPIKRFFTS 177


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 392 ILLAKNEVVCEDTVDI 439
           ILLA N  VC  T+++
Sbjct: 445 ILLAMNSAVCHQTIEL 460


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 392 ILLAKNEVVCEDTVDI 439
           ILLA N  VC  T+++
Sbjct: 170 ILLAMNSAVCHQTIEL 185


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 123 TVSEFHDLITYTYFHTIDTYTLHSIILLD 37
           TV +F+D+   ++   I   TLH +  +D
Sbjct: 192 TVDDFNDIFGISFLLIISYSTLHFVNYID 220


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 335 QRLLNIICDKYNLNSIKKNILL 400
           ++ +N+ICDK+  ++I   I L
Sbjct: 343 RQAVNLICDKFERSNIGVKIAL 364


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 335 QRLLNIICDKYNLNSIKKNILL 400
           ++ +N+ICDK+  ++I   I L
Sbjct: 343 RQAVNLICDKFERSNIGVKIAL 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,933
Number of Sequences: 336
Number of extensions: 3770
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)