Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0875
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88180-5|AAB42299.1|  340|Caenorhabditis elegans Hypothetical pr...    87   1e-17
U21322-7|AAA62545.1|   84|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical...    31   1.2  
Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U88180-5|AAB42299.1|  340|Caenorhabditis elegans Hypothetical
           protein T27A3.6 protein.
          Length = 340

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 40/83 (48%), Positives = 57/83 (68%)
 Frame = +2

Query: 512 DHIKLTVDRLSVEEISELVTDDSCGAISLFIGTTRDNFEGKKVLRLEYEAYESMAIKAIK 691
           DHIKLT + + V+ + +LV+  SCGAIS F G TRDN  G+ V  L Y+ ++ MA K ++
Sbjct: 196 DHIKLTDEVIDVKVVDQLVSHPSCGAISTFNGVTRDNHGGRDVSNLSYDCHDLMAYKKLR 255

Query: 692 TICDDVRQKWPLVHGIAIYHRLG 760
            IC ++R ++P V  IAI+HRLG
Sbjct: 256 GICAEIRAEYPDVKKIAIFHRLG 278


>U21322-7|AAA62545.1|   84|Caenorhabditis elegans Hypothetical
           protein K10D2.7 protein.
          Length = 84

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +2

Query: 245 VTVKLLFFAKSKELSGVRETSITLPRKLGYQRLLNIICDKYN-LNSIKKNILLAKNEVVC 421
           +++K+LFF ++ +L G RE +I  P +  Y+ +   I + Y  L  I+K ++LA ++   
Sbjct: 2   ISIKVLFFGEACQLVGKREEAIDFPEETDYEEIRKTILENYPALQKIEKVMMLAVDQEYA 61

Query: 422 EDTVDIEINEQDNLAVIPPLSGG 490
                 E+     +AVIPPLSGG
Sbjct: 62  NPGDRFELVRFTEIAVIPPLSGG 84


>AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical
           protein Y26D4A.13 protein.
          Length = 758

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +2

Query: 236 EDTVTVKLLFFAKSKELSGVRETSITLPRKLGYQRLLNIICDKYNLNSIK-KNILLAKNE 412
           E+TV   + F   +KE+ G ++ +I LP+ L Y++LLN   +K N++ IK K++   K +
Sbjct: 445 ENTVNPTVEFNTINKEIVGSKKINILLPKHL-YKKLLN--KNKSNISIIKVKDVYCLKQD 501


>Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical
           protein K04C1.1 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 25/107 (23%), Positives = 48/107 (44%)
 Frame = -2

Query: 712 SDVITNCFYRFYGHRFVGLIFQP*YLFSFKIVSSCANKQ*NCTAAIISYKFTYFFD*QSI 533
           S +I + FYR +   ++  I    YL SF  +    N   N    + ++  T+     ++
Sbjct: 34  SSMIGSPFYRLFAIGYIMNILT--YLNSFISIRLPQNTGIN--GNLSNFFLTHNEFNMNM 89

Query: 532 YC*FYMVHPVKYYLTSTQWWYNS*VVLFINFYIYCILTHYLVLSQKY 392
            C   + H + YY   TQ+ YN      I++  +C +T  L + +++
Sbjct: 90  GCPINLFHALHYYFAYTQYIYN----FLISYNRFCAITSLLDIEKRW 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,415,608
Number of Sequences: 27780
Number of extensions: 324134
Number of successful extensions: 772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)