Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0874
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0837 - 20925345-20926178                                         30   2.3  
11_06_0618 + 25565780-25566064,25566855-25567046,25567144-255674...    29   4.0  
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928...    29   4.0  
04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662,846...    28   9.3  

>10_08_0837 - 20925345-20926178
          Length = 277

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 187 YFLINMKNNRSSGKTSTMLFSTTVSLVDCDLYQLILYY 300
           Y+L ++K   S G  + + FSTTV L D     L++ Y
Sbjct: 40  YYLFSIKQLNSFGAAAVLAFSTTVPLSDIAFALLVIPY 77


>11_06_0618 +
           25565780-25566064,25566855-25567046,25567144-25567416,
           25567636-25567738,25568273-25568391,25568615-25568782,
           25568908-25569386,25569742-25569850,25569905-25570070,
           25571405-25571433
          Length = 640

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 388 SAAQVIRLILGNLWCHEYAERCQQRKIAQITTKILIFIHVL*TFYAN 528
           SAA +   ++G+ W H+  E+ QQ +I     + + F+     F +N
Sbjct: 317 SAANLHTEVIGSSWAHDLLEQIQQTRILGFVNRSVTFMQSQFPFISN 363


>02_05_0717 +
           31190626-31191234,31191954-31192394,31192699-31192802,
           31193000-31194384,31194508-31194548,31195065-31195133,
           31195335-31195435,31195747-31195825,31195939-31196037,
           31196119-31196187,31197609-31197658,31197749-31197925,
           31198045-31198152,31198224-31198290
          Length = 1132

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 150 PGIRK-QVKPASLLLFNKYEEQPQFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYI 326
           P +R+ +VK  S  + N  +E PQ  + I    L NG+ +     S D +    +  VY 
Sbjct: 540 PAVRRMKVKDISEYMINAAKENPQLAQKIHEVLLENGVVAPPDLFSEDSMEEPKDLIVYD 599

Query: 327 T 329
           T
Sbjct: 600 T 600


>04_02_0007 +
           8464923-8465155,8466037-8466591,8466645-8467662,
           8467768-8468485,8468651-8468937
          Length = 936

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 253 LWRKALSMSFLNCGCSSYLLKSSNDAGLT 167
           L+ K+ ++SF  CG +S   KS+N+A LT
Sbjct: 566 LYSKSSTVSFPICGSTSDSTKSNNEASLT 594


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,367,396
Number of Sequences: 37544
Number of extensions: 357003
Number of successful extensions: 864
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)