Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0874
         (758 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10520| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_36425| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_53042| Best HMM Match : DUF630 (HMM E-Value=9.4)                    29   5.4  

>SB_10520| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1280

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = -1

Query: 488  IFVVICAILRC*HLSAYSWHHKFPRISRITCAADFRKTKVLKREDNEVAGSVVSNVYVRF 309
            + +++C  L C  L    WH K   + +     +    + L+ E +EV  +  S++  RF
Sbjct: 1178 LVLILCCTLGCSVLLGLLWHAKHVHVGKRKVQQEEDPRRFLREELSEVVANFYSSINARF 1237


>SB_36425| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 81

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 568 YRLEVEKYRKRPNETYEHYVDFLNSTNQL 654
           YRL + K    PN+TY+H  + +NS NQ+
Sbjct: 44  YRLNMPKDIS-PNQTYKHQENLINSLNQV 71


>SB_53042| Best HMM Match : DUF630 (HMM E-Value=9.4)
          Length = 173

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 342 RDLIVFSLQDFRFTKISRASNTADSW-KFMVPRICREMSTAQNRADYNKNPY 494
           RD  V+S    R   +S    T D W K ++ ++C E + +  + DY++ PY
Sbjct: 69  RDYFVWSHYQ-RLPPVSARGLTEDLWSKDLLRKVCHETTRSIYQQDYHEPPY 119


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,554,820
Number of Sequences: 59808
Number of extensions: 459629
Number of successful extensions: 1159
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)