Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0870
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851...    31   1.5  
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883...    31   1.5  
03_02_0821 - 11519840-11519989,11520333-11520476,11520556-115207...    29   6.2  
02_05_1284 - 35449589-35450125,35450255-35451166,35451298-35451333     29   6.2  
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106...    29   6.2  

>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
            8511209-8511523,8511576-8511682,8512559-8512629,
            8512952-8513029,8513390-8513454,8514224-8514274,
            8514373-8514414,8514785-8515105,8515154-8517880
          Length = 1480

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +2

Query: 113  KNNVLYPAICSPQQLYNDLVDNYRFLPSSRELPIHLNPSNIHILMDVSSLSTF 271
            +N   +  I  P+ +    + N R L   RE P+ + PS IH L  + SLSTF
Sbjct: 1125 RNTYPFDTISLPRNV--SALSNLRHLVLPREFPVTI-PSGIHRLTKLQSLSTF 1174


>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
            30288447-30288641,30288743-30289363,30289688-30290257,
            30290332-30293638,30293764-30293863,30293978-30295014,
            30295256-30295604,30296299-30296374,30296456-30297022,
            30297094-30297238,30298281-30298405,30298491-30298582,
            30298646-30298828,30298946-30299058,30299499-30299649,
            30299720-30299882
          Length = 2701

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 59   IITLSFKLEDIANGLMFSKNNVLYPAICSPQQLYND 166
            ++TL   L+D  NGL     NV Y   C   +L+ND
Sbjct: 1217 LMTLQDHLKDAVNGLNHESLNVRYMVACELNKLFND 1252


>03_02_0821 -
           11519840-11519989,11520333-11520476,11520556-11520754,
           11521309-11521412,11521488-11521598,11521653-11521771,
           11521858-11522002,11522516-11522568,11522676-11522721,
           11522818-11522963,11523691-11523760,11524930-11525083,
           11525186-11525307,11525612-11525835,11526317-11526371,
           11526793-11526972
          Length = 673

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -1

Query: 734 QQFRCHKY*FRKYFYQDNRLTTLQPLTLQISICFRLVPAILQY 606
           Q + C  Y +  +F++D+   TL PLT+Q+S   +L  + L +
Sbjct: 522 QHYGCPNY-WMLHFFKDSSGATLHPLTIQVSNYDQLAASALTW 563


>02_05_1284 - 35449589-35450125,35450255-35451166,35451298-35451333
          Length = 494

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 260 LSTFYENNKIIFVVKIPLVNSLEFSMYRVLPY-PLSFKNESYITIIPTTNYIAFSRDRSQ 436
           L  ++ + +++ +  +P +  L+FS++ V P+ PLSF N   ++ +  TN     ++  +
Sbjct: 236 LDIYHASLELVELNYLPNLKHLDFSLW-VCPHEPLSFGNVPLLSSLSLTNVAMRYQEVIR 294

Query: 437 YCHFNDLSKCKSISQNYI 490
             HF  L+   +IS  Y+
Sbjct: 295 LSHF--LANVPNISDLYL 310


>01_05_0006 +
           17008799-17009417,17010035-17010162,17010425-17010650,
           17010792-17010925,17010988-17011161,17011234-17012238
          Length = 761

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 23/79 (29%), Positives = 36/79 (45%)
 Frame = +2

Query: 56  NIITLSFKLEDIANGLMFSKNNVLYPAICSPQQLYNDLVDNYRFLPSSRELPIHLNPSNI 235
           N+I  + KLED      F    +L  A  +P    ++ +D      SS + PI  +PSN 
Sbjct: 497 NLIEGAEKLEDSMKS-SFENGMILGSACGNPGVCNSEGIDGTE---SSADAPIEFSPSNS 552

Query: 236 HILMDVSSLSTFYENNKII 292
              +D S  ST Y  + ++
Sbjct: 553 ARDLDPSQTSTLYCQSSLL 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,763,178
Number of Sequences: 37544
Number of extensions: 366706
Number of successful extensions: 738
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)