BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0870
(851 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 25 2.2
AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like pepti... 25 2.9
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 763 AISYTAVRDLSNSGATNINFVNIFIRTID*QLCSP*HC 650
AI Y +D+S++ A N N+ ++ +D L HC
Sbjct: 124 AIEYMLEKDISDNRAIGDNGANVLVKGVDRPLKLLTHC 161
>AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like peptide
1 precursor protein.
Length = 154
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -3
Query: 642 HLFPLSSCHTSISLLIVLIEQLSGMD 565
HL + SC T++ LL+VL+ +SG+D
Sbjct: 8 HLLLVVSCGTALLLLLVLL-SVSGVD 32
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,354
Number of Sequences: 2352
Number of extensions: 16452
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -