Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0869
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.10 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.10
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 231 CSYIIFSSEFLLITYW-SLTIKIRLC-YHKYYKISHFKFKEKKIYAIY 94
           C +IIF+  FLL TY+      I LC Y+ YY    F      +  IY
Sbjct: 87  CPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIY 134


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 342 FVFDYCEFVDRDGIFFVLFS 401
           FV DY  FV+ + I +++FS
Sbjct: 141 FVPDYVFFVENEPILYLIFS 160


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = -1

Query: 322 HLLKVQNLDLFNKNTSARRGYVLEMVGSVTLFLYNFFFRISANHLLVP 179
           +L ++++LDL   + S+    + + VGS+ +F  N       N ++ P
Sbjct: 162 NLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVAP 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,777
Number of Sequences: 336
Number of extensions: 3650
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)