Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0866
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0370 + 2909216-2909797                                           42   4e-04
01_06_0061 - 26071984-26072343,26072792-26073139,26073228-260733...    30   1.9  
01_01_0320 - 2578911-2579144,2579243-2579455,2579580-2579858,257...    29   4.4  
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954...    28   7.7  
01_05_0657 + 24034198-24036306                                         28   7.7  

>05_01_0370 + 2909216-2909797
          Length = 193

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 25/93 (26%), Positives = 40/93 (43%)
 Frame = +3

Query: 294 MGYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAA 473
           M  A++++W E  G        L  +  QL+   +W P+  GL          + ++  A
Sbjct: 98  MALAAWMVWAE-GGLHRRPGATLAPFVAQLVAALAWAPLALGLAAPAAGLACCAAMAAGA 156

Query: 474 VATTLSFGSVNKTAGLLLIPYLAWLGYASSLSY 572
            A    FG VN  AG L  P +AW    + ++Y
Sbjct: 157 AACARGFGGVNPVAGDLAKPCVAWAVLLAVINY 189


>01_06_0061 -
           26071984-26072343,26072792-26073139,26073228-26073371,
           26073454-26073723,26075019-26075825
          Length = 642

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 4/31 (12%)
 Frame = +3

Query: 486 LSFGSV-NKT---AGLLLIPYLAWLGYASSL 566
           L+FGS+ N T    G+LL+  LAWLG ASSL
Sbjct: 551 LTFGSLANSTPYLGGILLVIVLAWLGAASSL 581


>01_01_0320 -
           2578911-2579144,2579243-2579455,2579580-2579858,
           2579961-2580050,2580258-2580439,2581366-2582470
          Length = 700

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 210 SWYDELKKPSWTPPK 254
           SW +E+KKPSW P K
Sbjct: 600 SWQEEIKKPSWHPYK 614


>01_05_0721 +
           24594815-24594834,24595207-24595313,24595417-24595472,
           24595562-24595810,24595871-24596077,24596157-24596243,
           24596331-24596426,24596500-24596715,24596908-24597090,
           24597222-24597449
          Length = 482

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -3

Query: 398 RPVE*QLYSVQCER*DCIFSKTITFLPDEVRGISHAAVENS 276
           R +E  + SV  ER   +FS T+   P+EVR ISH A++ +
Sbjct: 188 RDIERIIASVPKERQTLLFSATV---PEEVRQISHIAMKKN 225


>01_05_0657 + 24034198-24036306
          Length = 702

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +3

Query: 432 KLAFIEISVLSG-AAVATTLSFGSVNKTAGLLLIPYLAWLGYASSL---SYYIWKNNPKP 599
           +L  IE+ VL G AA+   L  GS  + +    +    W+ YA+S+   SY +      P
Sbjct: 3   RLVRIEVLVLLGVAALFVLLILGSYRRQSSRNAVRVSIWVAYAASIPMVSYTLGLMQSSP 62

Query: 600 VKGQ*RS*QWNILLY 644
            K    S  W I+L+
Sbjct: 63  YKNSLFS-VWAIILF 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,627,817
Number of Sequences: 37544
Number of extensions: 515157
Number of successful extensions: 1250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)