Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0865
(818 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 28 1.4
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 27 2.4
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 27 2.4
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 27 2.4
SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces ... 27 4.2
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 26 5.6
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 26 7.4
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 26 7.4
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 9.8
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 25 9.8
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 470 FQQQLRIAEHTLIFLNYCRSHYWYHKQDYI 381
F+++L AEH L+F C+ Y+ + D++
Sbjct: 2148 FRKRLFAAEHMLVFFQNCKLDYYRYVGDWV 2177
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 27.5 bits (58), Expect = 2.4
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -2
Query: 220 IVKIVSPRLPVPVISSPIMCSTIV*FFAACRLARTPIVGIFPPC*PLSRSVVKPIAVILV 41
IV+ V+P P +SPI + F LAR + I+ P SR+ + + + V
Sbjct: 26 IVESVNPITPWGYPASPISIARTTSGFLIAFLARHGVGHIYTPTEVPSRANIAALKSLGV 85
Query: 40 FPVVPFIAVRDL 5
+V F AV L
Sbjct: 86 LAIVSFSAVGSL 97
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 311 RQTTATAGS--PDIEACIRSCPVTSEYNPVCGTNNETYN-NLGRLMCAQQCGVVVEIQRK 481
RQ +A+AG P +C+ C + T+ + L R C CG EI +
Sbjct: 20 RQISASAGDLHPVYVSCVNRCIENKCHGNPSDTSKLPLDLKLFRWDCGSNCGYECEITAE 79
Query: 482 STCSAANVPTE 514
+ +A N+P++
Sbjct: 80 NYFAAHNLPSQ 90
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 474 NGKVRARQQTSLLNHRQVSTEEMVFYRLLMSLPISSNAFLYVLNQRKRG 620
NG + LLN R VST ++ + + +S P+ S ++ ++ + G
Sbjct: 1036 NGLEILHHEQLLLNKRNVSTSHLLSFTIPVSNPLPSQLYIIAVSDKWLG 1084
>SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 263 HENWADTDVHAGQMDSENCVPKVASSCDFLPHN 165
HE+ DTD H ++++N PK + F+ N
Sbjct: 64 HESHVDTDYHGQALNTDNQDPKNYQARSFVKEN 96
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = +2
Query: 170 GGGNHRNWQPWGHNFHYPSGQHEHRYRPNFHAYD 271
G NH N + H+ H H + + H++D
Sbjct: 280 GSTNHHNNHESDKDLHHEGHHHHHHHHHHHHSHD 313
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 233 HEHRYRPNFHAYDLNLRPEFNG 298
HE+R+ P+ Y L +RP F G
Sbjct: 135 HENRWVPDQRGYSLYIRPTFIG 156
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 630 LQTESHIEIHWQSFVLRCVDLTSE-PRSCQHAQSIIESPWSNSH 758
L ++SH + +Q+ V+ D+ +E PR HA + S ++S+
Sbjct: 276 LPSQSHYQTQFQASVVPRTDVINEPPRRYSHANGVTTSGTTHSY 319
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 474 NGKVRARQQTSLLNHRQVSTEEMVFYRLLMSLPISSNAFLYVLNQRKRGLF 626
NG + Q+ S H + E ++F RLL+ S F Y K G+F
Sbjct: 566 NGSIFTAQEWSEKLHLSSTNEVLLFRRLLVE---SLKGFSYYQTDEKTGVF 613
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 209 NFHYPSGQHEHRYRPNF-HAYDLNLRPEF 292
NFHY + +Y P F H D++ RP +
Sbjct: 89 NFHYDEKEAVSKYYPQFYHKTDIDGRPVY 117
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,694,670
Number of Sequences: 5004
Number of extensions: 83754
Number of successful extensions: 229
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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