Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0865
         (818 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   2.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.8  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 206 HNFHYPSGQHEHRYRPNFHAYDLNLRPEFNGN 301
           H+ H P  QH+ +Y  + H   +  + E + N
Sbjct: 313 HHQHQPQQQHQQQYHSHPHHTPVQFKTELHDN 344


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
 Frame = +2

Query: 401  TNNET-YNNLGRLMCAQQCGVVVEIQRKSTCSAANVPTESSTSFDRGDG--LLQTTDVPA 571
            + NET Y++  +LM   + G + E+    T   A +      S   G    +L   + P 
Sbjct: 1105 SENETEYSSSDQLMGGGKPGPLKEVNGVVTRKGAPMKFGPGVSGPGGSKTPILNRKEKPK 1164

Query: 572  NIQQCISLCPQSEETRPVC 628
            +   C  + P    T PVC
Sbjct: 1165 SCSVCRQISPTVNSTEPVC 1183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 970,434
Number of Sequences: 2352
Number of extensions: 22797
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)