Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0865
         (818 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              30   0.022
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   1.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   7.8  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   7.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   7.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 30.3 bits (65), Expect = 0.022
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 584 CISLCPQSEETRPVCASNGVTYRNPLAI-LCAQMCGLDIRATKLSAC 721
           C+  CP+    RPVCASNG  Y N   +   A   G  +  ++L  C
Sbjct: 106 CMRKCPRRH--RPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRC 150



 Score = 27.1 bits (57), Expect = 0.21
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 353 CIRSCPVTSEYNPVCGTNNETYNN 424
           C+R CP    + PVC +N + Y N
Sbjct: 106 CMRKCP--RRHRPVCASNGKIYAN 127


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 254 NFHAYDLNLRPEFNGNRFNRQTTATAGSPDIEAC-IRSCPVTSEYNP 391
           N H Y  ++  E N N+F   TT   G+ ++ A  +  C +  + +P
Sbjct: 449 NNHEYKRSVSRESNSNQFILMTTVNEGNNNMAATYMNECLLNIQKSP 495


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 32  NRKNQDHGDWFHHGSRQWSTRRKDSHD 112
           N+ N  H D  HH S+  S  R +++D
Sbjct: 440 NQNNNQHNDQAHHSSK--SNNRHNNND 464


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 11  TDCYEWHNRKNQDHGDWFHHGSRQWSTRRKDS 106
           +D  E ++R +       HHGS+ W+    D+
Sbjct: 387 SDSGENNSRGHSGQSSSHHHGSKSWTQEDMDA 418


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 236 HAGQMDSENCVPKVAS 189
           HA   DSEN VP+  S
Sbjct: 429 HASVTDSENTVPRYLS 444


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 641 VTYRNPLAILCAQMCGLDIRATK 709
           + + + +AILC+Q  G D+   K
Sbjct: 16  LVHADTVAILCSQKAGFDLSDLK 38


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 641 VTYRNPLAILCAQMCGLDIRATK 709
           + + + +AILC+Q  G D+   K
Sbjct: 16  LVHADTVAILCSQKAGFDLSDLK 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,714
Number of Sequences: 438
Number of extensions: 6207
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)