Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0865
(818 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g63100.1 68416.m07087 glycine-rich protein 32 0.40
At5g54020.1 68418.m06719 expressed protein 31 0.92
At3g31980.1 68416.m04050 hypothetical protein low similarity to ... 31 1.2
At3g03730.1 68416.m00378 F-box family protein contains F-box dom... 30 1.6
At1g62600.1 68414.m07062 flavin-containing monooxygenase family ... 30 1.6
At5g37450.1 68418.m04507 leucine-rich repeat transmembrane prote... 30 2.1
At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger) fa... 29 3.7
At5g44630.1 68418.m05468 terpene synthase/cyclase family protein 29 4.9
At4g20920.1 68417.m03032 double-stranded RNA-binding domain (DsR... 29 4.9
At1g63370.1 68414.m07164 flavin-containing monooxygenase family ... 28 6.5
At1g62620.1 68414.m07065 flavin-containing monooxygenase family ... 28 6.5
At5g19640.1 68418.m02337 proton-dependent oligopeptide transport... 28 8.6
At4g19530.1 68417.m02873 disease resistance protein (TIR-NBS-LRR... 28 8.6
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 28 8.6
At3g02270.1 68416.m00208 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 28 8.6
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 32.3 bits (70), Expect = 0.40
Identities = 28/114 (24%), Positives = 39/114 (34%), Gaps = 3/114 (2%)
Frame = +2
Query: 50 HGDWFHHGSRQWSTRRKDSHDWGXXXXXXXXXXDYGATHYGG---GNHRNWQPWGHNFHY 220
HG + HG R+ R H G +G H G G+HR GH H+
Sbjct: 75 HGHGYGHGHREHGHDRGHGHGRGHGHGHGHGHRRHGRDHRHGRDRGHHR-----GHGHHH 129
Query: 221 PSGQHEHRYRPNFHAYDLNLRPEFNGNRFNRQTTATAGSPDIEACIRSCPVTSE 382
G R R + H + G R+ ++ G CI P+ E
Sbjct: 130 HRGHRRGRGRGHGHGRGRGGHVQEAGERWEQEVGGRGGG----ICITLWPLVKE 179
>At5g54020.1 68418.m06719 expressed protein
Length = 556
Score = 31.1 bits (67), Expect = 0.92
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 587 ISLCPQSEETRPVCASNGVTYRNPLAI 667
+ +CP +E TRP+C+ V +NP I
Sbjct: 513 VEICPNNEATRPLCSGCKVRCKNPFFI 539
>At3g31980.1 68416.m04050 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1099
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 428 GRLMCAQQCGVVVEIQRKSTCSAANVPTESSTSFDRGD-GLLQTTDVPANIQQCISLCPQ 604
GR+ V+++I + AN P E+ T GD LLQ + P QQ LCP+
Sbjct: 831 GRVSEPNDGEVLIDIPEELLIKDANDPIEAITKAVYGDLDLLQPNNDPKFFQQRAILCPR 890
Query: 605 SEETRPV 625
+ + +
Sbjct: 891 NTDVNTI 897
>At3g03730.1 68416.m00378 F-box family protein contains F-box domain
Pfam:PF00646
Length = 393
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 2 IQVTDCYEWHNRKNQDHGD-WFHHGSRQWSTRRKDSHDW 115
++++D W + KN D+ WFHH + + + D++ W
Sbjct: 173 LRISDAVLWVDEKNGDYFVVWFHHSTFAYHKKGGDNNSW 211
>At1g62600.1 68414.m07062 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
flavin-containing monooxygenase 2 from Cavia porcellus
[SP|P36366]; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 452
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 259 KIGPIPMFML-ARWIVKIVSPRLPVP 185
K+ P PMF L ++WI ++S R+P+P
Sbjct: 335 KVVPFPMFELQSKWIAGVLSGRIPLP 360
>At5g37450.1 68418.m04507 leucine-rich repeat transmembrane protein
kinase, putative
Length = 935
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/108 (20%), Positives = 43/108 (39%)
Frame = +2
Query: 377 SEYNPVCGTNNETYNNLGRLMCAQQCGVVVEIQRKSTCSAANVPTESSTSFDRGDGLLQT 556
+E + N ++N+ ++ V V++ C+ N + G L+
Sbjct: 295 AEEKLILDLRNNMFSNVSSVLLNPPSNVTVKLYGNPVCANVNAGKLADLC---GISTLEV 351
Query: 557 TDVPANIQQCISLCPQSEETRPVCASNGVTYRNPLAILCAQMCGLDIR 700
+ PA + IS ++ PV + +P+A CA G+D+R
Sbjct: 352 -ESPATSSETISTGDCKRQSCPVSENYDYVIGSPVACFCAAPLGIDLR 398
>At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 203
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 LNHRQVSTEEMVFYRLLMSLPISSNAFLYVLNQRKRGLFVLQTESHIEIHWQSFVLRCVD 689
+N R+V R L S P +N+ + ++ + +FV QT H L C+D
Sbjct: 1 MNSRKVEFRFTNLQRKLSS-PSHANSVIVEIDTKSEEIFVNQTTDHQTRRSTPATLSCLD 59
Query: 690 -LTSEPRSCQHAQSIIESPWSNSH 758
+ S H +S++ + +++ H
Sbjct: 60 TINLSSSSHDHIRSLLRTRFASHH 83
>At5g44630.1 68418.m05468 terpene synthase/cyclase family protein
Length = 557
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = -1
Query: 608 LIEDIKKCIAGYWQGHQ*SVEDHLL-------CRNLSMIQ*GRLLPSTYFSVVFQQQLRI 450
LIED+K ++ Y H + DH+L +L + GR + S + Q L I
Sbjct: 146 LIEDVKGMLSFYEAVHFGTTTDHILDEALSFTLNHLESLATGRRASPPHISKLIQNALHI 205
Query: 449 AEHTLIFLNYCRSH--YWYHKQDY 384
+H I R + ++ H++D+
Sbjct: 206 PQHRNIQALVAREYISFYEHEEDH 229
>At4g20920.1 68417.m03032 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 870
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 469 NTTEKYVLGSKRPY*IIDKFRQRRWSSTD 555
N EK GS +PY II K+ +R+W D
Sbjct: 842 NIVEKVSEGSMQPYKIIWKWSKRKWREKD 870
>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
protein / FMO family protein similar to FMO5 from Cavia
porcellus [SP|P49109]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 450
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 250 PIPMFML-ARWIVKIVSPRLPVP 185
P PMF L ++WI ++S R+P+P
Sbjct: 336 PFPMFELQSKWIAGVLSGRIPLP 358
>At1g62620.1 68414.m07065 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 3 (FMO3) from Rattus
norvegicus [GI:12006730], FMO1 from Canis familiaris]
[GI:15420722], FMO1 from Homo sapiens [SP|Q01740];
contains Pfam profile: PF00743 Flavin-binding
monooxygenase-like
Length = 450
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 250 PIPMFML-ARWIVKIVSPRLPVP 185
P PMF L ++WI ++S R+P+P
Sbjct: 336 PFPMFELQSKWIAGVLSGRIPLP 358
>At5g19640.1 68418.m02337 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 609
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 816 WFVLSGGGTGFNTVRV-LSDSGCWTTGFRLSIVHADNFVALMS 691
+F L+ G NT+ V D G WT GF +S+ A VAL++
Sbjct: 221 YFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSA--IVALVA 261
>At4g19530.1 68417.m02873 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1167
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 272 LNLRPEFNGNRF-NRQTTATAGS-PDIEACIRSCPVTSEYN 388
LNL P +N NRF A GS P+ + SC VT +N
Sbjct: 969 LNLLPHWNENRFVGIALCAVVGSLPNCQEQTNSCSVTCTFN 1009
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 164 HYGGGNHRNWQPWGHNFHYPSGQHEHRYRPNFHAYD 271
H+ G + WQP H H+ QH H + N H+Y+
Sbjct: 497 HHSGPSPSRWQP-SHQHHH-HHQHLHHHHQN-HSYE 529
>At3g02270.1 68416.m00208 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein similar to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 676
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 623 VCASNGVTYRNPLAILCAQM--CGLDIRATKLSACTIDN 733
+C + RNP +LC+ M C +DI + ++ + +DN
Sbjct: 196 ICFDKSLLDRNPSVLLCSDMQDCYIDICSLEVLSLFVDN 234
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,884,933
Number of Sequences: 28952
Number of extensions: 465652
Number of successful extensions: 1150
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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