Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0864
         (742 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550...    28   9.0  
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444...    28   9.0  
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051...    28   9.0  
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369...    28   9.0  
08_01_0158 + 1269407-1269435,1270270-1270369,1271046-1271123,127...    28   9.0  
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192...    28   9.0  

>12_02_0642 +
           21454142-21454251,21454683-21454872,21454988-21455069,
           21455224-21455802,21455854-21456909,21457133-21457251,
           21457369-21457812
          Length = 859

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 412 VNVWKYMEIRFNFSF-TSLYLLQYFIGPYYLY 504
           + VW  ++ R++    T L+L  Y++ PYY Y
Sbjct: 627 IEVWDIIDKRWDNKLKTPLHLAGYYLNPYYYY 658


>12_02_0639 +
           21443480-21443589,21444022-21444211,21444327-21444408,
           21444563-21445054,21445221-21446246,21446470-21446588,
           21446706-21447149
          Length = 820

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 412 VNVWKYMEIRFNFSF-TSLYLLQYFIGPYYLY 504
           + VW  ++ R++    T L+L  Y++ PYY Y
Sbjct: 588 IEVWDIIDKRWDNKLKTPLHLAGYYLNPYYYY 619


>12_02_0633 +
           21402847-21402862,21403143-21404975,21405052-21405170,
           21405288-21405722
          Length = 800

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 412 VNVWKYMEIRFNFSF-TSLYLLQYFIGPYYLY 504
           + VW  ++ R++    T L+L  Y++ PYY Y
Sbjct: 522 IEVWDIIDKRWDNKLKTPLHLAGYYLNPYYYY 553


>10_08_0848 +
           21035446-21035461,21035742-21036233,21036400-21036956,
           21037084-21037539,21037886-21038302
          Length = 645

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 412 VNVWKYMEIRFNFSF-TSLYLLQYFIGPYYLY 504
           + VW  ++ R++    T L+L  Y++ PYY Y
Sbjct: 424 IEVWDIIDKRWDNKLKTPLHLAGYYLNPYYYY 455


>08_01_0158 +
           1269407-1269435,1270270-1270369,1271046-1271123,
           1271688-1271704,1272402-1272495
          Length = 105

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 204 LNVFSFILYRFFFMVRQCC 260
           L+++SF++Y F + V+ CC
Sbjct: 28  LHLYSFVIYLFLYKVKVCC 46


>01_06_0544 +
           30118208-30118417,30118959-30119063,30119179-30119260,
           30119415-30121250,30121327-30121445,30121563-30122006
          Length = 931

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 412 VNVWKYMEIRFNFSF-TSLYLLQYFIGPYYLY 504
           + VW  ++ R++    T L+L  Y++ PYY Y
Sbjct: 649 IEVWDIIDKRWDNKLKTPLHLAGYYLNPYYYY 680


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,856,442
Number of Sequences: 37544
Number of extensions: 206865
Number of successful extensions: 299
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)