Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0864
         (742 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g56000.1 68416.m06222 glycosyl transferase family 2 protein s...    30   1.9  
At1g04900.1 68414.m00487 expressed protein contains Pfam PF02636...    29   4.3  

>At3g56000.1 68416.m06222 glycosyl transferase family 2 protein
           similar to beta-(1-3)-glucosyl transferase GB:AAC62210
           GI:3687658 from [Bradyrhizobium japonicum], cellulose
           synthase from Agrobacterium tumeficiens [gi:710492] and
           Agrobacterium radiobacter [gi:710493]; contains Pfam
           glycosyl transferase, group 2 family protein domain
           PF00535
          Length = 535

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 382 IALKIFD*QNVNVWKYMEIRFNFSFTSLYLLQYFIGPYY 498
           IA++I   QNV++WK + + +NF F    ++  F   +Y
Sbjct: 338 IAMEIIKNQNVSLWKKVYLIYNFFFLRKIVVHIFTFVFY 376


>At1g04900.1 68414.m00487 expressed protein contains Pfam PF02636:
           Uncharacterized ACR, COG1565
          Length = 442

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 277 FLDSFGQHCRTMKKKRYNIKLNTFSNNKHILHI 179
           F+D FG   +T  K  YN  L+ F N K  L +
Sbjct: 404 FMDEFGLPSKTRTKDGYNPLLDDFKNTKFYLSV 436


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,374,504
Number of Sequences: 28952
Number of extensions: 199832
Number of successful extensions: 314
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)