Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0859
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 31 0.80
12_02_0724 + 22541409-22541605,22542850-22542922,22543019-225430... 30 2.5
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 30 2.5
01_06_0327 + 28506354-28506469,28506568-28507168,28507397-28507531 29 4.3
11_06_0594 + 25349612-25352530 28 7.5
11_06_0567 - 25038537-25038957,25039059-25039252 28 9.9
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 28 9.9
04_04_1680 + 35318330-35318693,35319789-35319877,35320082-353200... 28 9.9
03_05_0111 - 20919291-20919439,20920128-20920237,20920341-209204... 28 9.9
01_06_0495 - 29779499-29781325 28 9.9
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 521 SDAGKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKEVLGKRDAR 691
S G + SD EYD +++D R + ++E KLS E++ + RD R
Sbjct: 50 SSGGGYAVEQFSDDEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRR 106
>12_02_0724 +
22541409-22541605,22542850-22542922,22543019-22543081,
22543598-22543654,22543909-22544001
Length = 160
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Frame = +2
Query: 416 SSIGSYLS*ASTAKNRPRKTNSSFILKFSTRFPSTSDAGKSKRDHSSDGEYDR------- 574
SS S S S + R + S + S+S A K+++D SS YD
Sbjct: 21 SSSDSSSSSGSDRRRRRARHRSGHRKDAAAAAASSSSALKARKDRSSSSSYDSEHEGKSC 80
Query: 575 KHKDSRIMEEMQGLEELESKLSAYHVMVEKEVLGK 679
KHK SR + + E + + S KE LG+
Sbjct: 81 KHKKSRSSRKSRERERSKDRHSKRDKSKHKEFLGR 115
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +2
Query: 614 LEELESKLSAYHVMVEKEVLGKRDARSPSLDQVP-----APPLDKPKWKMSMNAVKELGQ 778
L+E++ KLS H +EKE K DA+ +++Q P P +D K ++ KEL
Sbjct: 1175 LQEMQEKLSEAHAAIEKE---KEDAKL-AIEQAPPKIVEVPVVDNAKVELLTRQNKELED 1230
Query: 779 EKET 790
E T
Sbjct: 1231 ELVT 1234
>01_06_0327 + 28506354-28506469,28506568-28507168,28507397-28507531
Length = 283
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -1
Query: 580 MLSIILSIRTMVSLGLACIACTRKSCAKFQYETAIGFSWPILSRTGSR 437
+L II RT+V LA R SC + ++ G ++P L TGSR
Sbjct: 58 ILEIIYDSRTIV---LADTDALRGSCPRVRHNVTFGQAYPWLQYTGSR 102
>11_06_0594 + 25349612-25352530
Length = 972
Score = 28.3 bits (60), Expect = 7.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2
Query: 245 AICFCLSVHFAQWVSKASGILSLIF 319
++CFC +H + W+S A +L+ +
Sbjct: 426 SLCFCSPLHLSSWLSNAEKMLTFCY 450
>11_06_0567 - 25038537-25038957,25039059-25039252
Length = 204
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 230 CASCFAICFCLSVHFAQWVSKASGILSLI 316
C + A FC VH A +VS A+G+ L+
Sbjct: 135 CTTAAAGNFCNQVHIAMYVSLAAGVALLV 163
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 750 DIFHLGLSRGGAGTWSRLGDLASR 679
D FHLGLS G G S G ASR
Sbjct: 81 DSFHLGLSSGDEGEASTRGPAASR 104
>04_04_1680 +
35318330-35318693,35319789-35319877,35320082-35320087,
35320638-35321300
Length = 373
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 524 DAGKSKRDHSSDGEYDRKHKDSRIMEEMQGLEEL--ESKLSAYHVMVEKEVLGKRDARSP 697
+A ++K +G R+ ++ + + +++ E +++ Y M+E+E G RD+R
Sbjct: 2 EAAETKGRGGGEGRKCRREEEEAFAAKSRRIDDQDDEERMNNYTPMLEEEEDGCRDSRCA 61
Query: 698 SLDQVPAPPLDKPKWKMSMNAVKELGQEKET 790
L LD + + + VK Q+K T
Sbjct: 62 ELVFGEEEELDPVQMEEKLRQVKLELQDKYT 92
>03_05_0111 -
20919291-20919439,20920128-20920237,20920341-20920466,
20920545-20920632,20920933-20921053,20921159-20921231,
20921399-20921462,20921543-20921739,20921844-20921899,
20922050-20922146,20923731-20923870
Length = 406
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 455 KNRPRKTNSSFILKFSTRFPSTSDAGKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESK 634
K R + I++F +TS D + D E DRKH D ++ ++G EL +K
Sbjct: 166 KRRKLEEEKGIIIRFVIGHSATSGG---ILDRAIDAE-DRKHGDFMRLDHVEGYLELAAK 221
Query: 635 LSAYHV 652
++ V
Sbjct: 222 TKSFFV 227
>01_06_0495 - 29779499-29781325
Length = 608
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 315 IKDKIP-EALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDF 139
+KD IP L T +K D K A++L G+ + W+ I Y G+YQ + + F
Sbjct: 148 VKDPIPMNCLITGYSKSGDVVK--ARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,203,568
Number of Sequences: 37544
Number of extensions: 361572
Number of successful extensions: 1110
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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