Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0857
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 175 5e-44
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 168 4e-42
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 154 7e-38
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 131 6e-31
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 113 2e-25
05_02_0126 - 6857200-6857907,6858102-6858554,6858626-6858715,685... 33 0.20
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 30 1.9
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 30 2.5
09_02_0347 + 7604466-7604622,7604809-7605146 29 4.4
05_06_0149 - 25991761-25993181,25993246-25993324 29 4.4
01_01_0841 - 6564029-6564348,6564654-6564686,6564793-6565450,656... 29 5.8
08_02_0028 - 11371547-11371657,11372326-11372518,11372738-113728... 28 7.7
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 175 bits (425), Expect = 5e-44
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Frame = +3
Query: 195 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDES 374
+G+++WRI+NF+P+PV GKFY GDSYIIL+TT+ + D+HYW+G++++QDE+
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 375 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGA 554
G AAILTV LD GG AVQ+RE G E+ LSYF+ + GG SGFNHV N
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQD 156
Query: 555 Q-KRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFA 731
R++ +GK V V++V +S+N D+F+LD N I+ F G + E+ KA+
Sbjct: 157 HVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVV 216
Query: 732 NQVRDQDHHGRGRVDIVD 785
++D H G+ V V+
Sbjct: 217 QYIKDTFHEGKCEVAAVE 234
Score = 57.2 bits (132), Expect = 1e-08
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Frame = +3
Query: 192 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT-TSDNRNNLSWDIHYWIGRESTQD 368
T +Q+WR+ ++ D K Y GD YI T T D++ I W G++S ++
Sbjct: 406 TGHLQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEE 463
Query: 369 ESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNA 548
+ +A L + A Q R G E F FQ+ L +GG SG+ + +
Sbjct: 464 DRTSAISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQS-LQVFKGGLSSGYKNFIAVN 522
Query: 549 GAQK--------RMFQVK--GKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAK 698
G +F+++ G +++ QVD +S+N ++L N ++ + G
Sbjct: 523 GTDDDTYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTWTGNLTT 582
Query: 699 NVE 707
+++
Sbjct: 583 SLD 585
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 168 bits (409), Expect = 4e-42
Identities = 80/198 (40%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Frame = +3
Query: 195 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDES 374
+G++IWRI+ + +PV ++ G+F+ GDSY+IL+TT+ + DIHYW+G++++QDE+
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 375 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGA 554
G AAI TV LD GG AVQ+RE G+E+ FLSYF+ + EGG SGF H N
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINERE 195
Query: 555 Q-KRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFA 731
R+F +GK V V++V +S+N D+F+LD + I+ F G + E+ KA+
Sbjct: 196 HVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVV 255
Query: 732 NQVRDQDHHGRGRVDIVD 785
++D +H G+ V V+
Sbjct: 256 QYLKDSNHEGKCDVGSVE 273
Score = 63.3 bits (147), Expect = 2e-10
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 19/242 (7%)
Frame = +3
Query: 42 FSCLLFVLLGSVWARTATK--PQEISGPITSLSDK---NARDKAKVHPAFAN----VGRT 194
F ++F S W + A E G + +L + N + AK P + T
Sbjct: 391 FETVIFRSKFSKWPKKADAVVSDESRGKVAALLKRQGFNVKGLAKAAPVKEEPQPQIDCT 450
Query: 195 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDES 374
+Q+WR+ E ++ + KFY GD Y I + + I W G++S QDE
Sbjct: 451 GNLQVWRVNGTEKTFLSFSEQCKFYSGDCY-IFQYSYPGEEGEECLIGTWFGKKSVQDEK 509
Query: 375 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGA 554
A + + + AV R G E A F S FQ L +GG +G+ V+ G
Sbjct: 510 TTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTGYKKFVSENGI 568
Query: 555 QK--------RMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNV 704
+ +F+V+G +++ QVD S+N +VL + ++ ++G + ++
Sbjct: 569 EDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTLFTWIGNLSSSM 628
Query: 705 EK 710
++
Sbjct: 629 DQ 630
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 639 DVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQD 752
DVF+LD + ++V+VG++ + +A+S + + D
Sbjct: 710 DVFILDCHSCVFVWVGQRVDTKMRAQALSVGEKFLELD 747
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 154 bits (374), Expect = 7e-38
Identities = 82/198 (41%), Positives = 115/198 (58%)
Frame = +3
Query: 192 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDE 371
T G++IWRI+NF+P+P+ GKF+ GDSYIIL+TT+ +L DIHYWIG++++QDE
Sbjct: 49 TGGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDE 108
Query: 372 SGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAG 551
SG AAILTV LD GG AVQ+RE G+E+ FLSYF+ + GG SGF HV
Sbjct: 109 SGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHV----- 163
Query: 552 AQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFA 731
+V +S+N D+F+LD + I+ F G + E+ KA+
Sbjct: 164 -----------------EVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVV 206
Query: 732 NQVRDQDHHGRGRVDIVD 785
++D H G+ V V+
Sbjct: 207 QYIKDTFHEGKCEVAAVE 224
Score = 60.9 bits (141), Expect = 1e-09
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Frame = +3
Query: 156 AKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYII-LRTTSDNRNNLSWD 332
AK P A + T +Q+WRI + + I + D KFY GD YI D++
Sbjct: 391 AKEEPQ-AYIDCTGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL-- 447
Query: 333 IHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGG 512
I W G++S +++ A L + + AVQ R G E F FQ+ +GG
Sbjct: 448 IGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKGG 506
Query: 513 NPSGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLD 662
SG+ + G +F+++G +++ QVD +S+N ++L
Sbjct: 507 LSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHDG 566
Query: 663 NDIYVFVGEKAKNVEK 710
N ++ + G ++++
Sbjct: 567 NTVFTWTGNLTTSLDQ 582
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 639 DVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQ 737
DVF+LD +DI+V+VG++ +L+A+ +
Sbjct: 652 DVFILDCHSDIFVWVGQQVDVKVRLQALDIGEK 684
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 131 bits (317), Expect = 6e-31
Identities = 72/166 (43%), Positives = 98/166 (59%)
Frame = +3
Query: 288 ILRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESAL 467
I T S +DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDK 113
Query: 468 FLSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVF 647
FLSYF+ + LEGG SGF + R++ KGKR +RV++V +S+N DVF
Sbjct: 114 FLSYFKPCIIPLEGGFASGFK-TPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVF 172
Query: 648 VLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD 785
+LD + IY F G + E+ KA+ +++ H+G V IVD
Sbjct: 173 ILDTEKKIYQFNGANSNIQERAKALEAIQHLKETYHNGVCDVAIVD 218
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/154 (24%), Positives = 68/154 (44%)
Frame = +3
Query: 120 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 299
I S +A +V P G+ ++++ + + ++++GKFY GD YI+L T
Sbjct: 376 IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYT 432
Query: 300 TSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSY 479
+ + YWIG++S ++ A + + G + R G E F++
Sbjct: 433 YHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIAL 492
Query: 480 FQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKG 581
FQ P+ L+GG SG+ V G + + G
Sbjct: 493 FQ-PMVILKGGISSGYQKFVEEKGLKDETYSGDG 525
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 113 bits (271), Expect = 2e-25
Identities = 63/201 (31%), Positives = 103/201 (51%)
Frame = +3
Query: 162 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHY 341
V AF VG G+ IW I I + + GKFY G++YIIL T ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 342 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPS 521
W+G E+ +++ A+ + LD G VQ+RET G ES FLSYF+ + ++ G+ S
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQ-GSLS 122
Query: 522 GFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKN 701
+ + MF+ +G+ RV +V +S++ VFV+D ++ I++F G +
Sbjct: 123 SHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNSSM 182
Query: 702 VEKLKAISFANQVRDQDHHGR 764
+ KA+ +++ H GR
Sbjct: 183 QTRAKALDVVKHLKENRHCGR 203
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/134 (23%), Positives = 57/134 (42%)
Frame = +3
Query: 201 VQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDESGA 380
+++W + N + ++ + Y GD YII + ++ + W G S ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 381 AAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGAQK 560
AA L G+ D G AV + G E +F F++ L +GG + + V+
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGGRSMAYKNFVSQRSDAN 519
Query: 561 RMFQVKGKRDVRVR 602
+Q G RV+
Sbjct: 520 GWYQKNGVALFRVQ 533
>05_02_0126 -
6857200-6857907,6858102-6858554,6858626-6858715,
6858802-6859215,6859357-6859581
Length = 629
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 372 SGAAAILTVGLD-DKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNA 548
+ A+ +LTV D G H + L + ++ +NY+ G NP G +++V
Sbjct: 354 TSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYG 413
Query: 549 GAQKRMFQVKGKRDVRVRQVDPQIASMNKG 638
+ R +G V +++ DP S +G
Sbjct: 414 ASYPRQVHHRGASIVSIKR-DPSFVSCQEG 442
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +2
Query: 161 GPPGFCQCRQNSRCANMENTELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSVMGHPL 340
GP C+ S ++ ++T+++ +R S HR + RR + D + + HP
Sbjct: 285 GPSDPCEIGSESMQSSRKSTDVKDKSRSSIDHRHSVDRREKPRGSIDRRDKSRKSIDHPD 344
Query: 341 LDRSGVD 361
R+ VD
Sbjct: 345 KPRASVD 351
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +1
Query: 472 YHISRHP*TIWREGIRPVLTTSSRTREPRNECSRSRGSEMSALDKSIRR*LR*TKATSSF 651
+ + RH +W+E +R + R++ + +R S+ + + R +
Sbjct: 604 FRVLRH---LWKEDVRLLSVRKQRSKSHKRTDQSNRSSQSGSQRQRSSNRSRLAVPAGNL 660
Query: 652 LI*TTTSMSLSARKLKTLRSLKRFRSPIKYGIRIITDAEES 774
T MS ARKL + LKR R+ +K I+ + E++
Sbjct: 661 STFPITEMSGVARKLFSEFQLKRCRNYLKMPALIVDEKEKA 701
>09_02_0347 + 7604466-7604622,7604809-7605146
Length = 164
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 176 CQCRQNSRCANMENTELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSVMGHPLLDRSG 355
CQ R N + +N + +R + H ++QR F+ +T +Q + + DRSG
Sbjct: 43 CQGRSNMFKGDCKNKNM-FESRVDDLHSHLIQRGFMKGYTCWAKHGEQELGSGAVADRSG 101
Query: 356 VD 361
D
Sbjct: 102 AD 103
>05_06_0149 - 25991761-25993181,25993246-25993324
Length = 499
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -3
Query: 469 NKALS*PMVSRCWTAAPPNLSSRPTVRMAAAPDSSCVDSRPIQ*WMSHDRLLRLSEVVRK 290
N A+S ++R AA P++ T R+ APDS V + PI+ SHD L + V+R+
Sbjct: 71 NDAVSADAMARL-AAANPSI----TFRLLPAPDSPDVGAHPIK--RSHDTLKLANPVLRE 123
Query: 289 MMYESP 272
+ P
Sbjct: 124 FLRSLP 129
>01_01_0841 -
6564029-6564348,6564654-6564686,6564793-6565450,
6565530-6565694,6565789-6565878,6565982-6566182,
6566525-6566737,6566835-6567077
Length = 640
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +3
Query: 378 AAAILTVGLDDKFGGAAVQHRETMGHES--ALFLSYFQTPLNYLEGGNPSGFNHVVTNAG 551
+A+ L D G AV+ G + A L++ ++ ++Y+ G NP G +++V
Sbjct: 362 SASFLLAVYSDHLAGGAVRCSGGGGAVAGAAELLAFAKSQVDYILGSNPRGTSYMVGYGA 421
Query: 552 AQKRMFQVKGKRDVRVRQVDPQIASMNKG 638
R +G +R P S +G
Sbjct: 422 VYPRQAHHRGSSIASIR-ASPSFVSCREG 449
>08_02_0028 -
11371547-11371657,11372326-11372518,11372738-11372814,
11373498-11373608,11374533-11374659,11374745-11375022
Length = 298
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 64 CWDPSGHGRRPSLRR*AGRSHRCQIKTPVTKLRSTRLLPMS 186
CW P+ RP+ R RC ++T +L S R+ +S
Sbjct: 245 CWSPNSRLFRPTEERDRKIPTRCSLETEYFQLESIRIYDLS 285
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,264,824
Number of Sequences: 37544
Number of extensions: 519116
Number of successful extensions: 1675
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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