Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0857
(813 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 148 6e-36
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 122 5e-28
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 5e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 54 1e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 52 4e-07
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 44 2e-04
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 44 2e-04
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 42 4e-04
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 42 6e-04
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17) 31 1.5
SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025) 30 1.9
SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_6995| Best HMM Match : DUF740 (HMM E-Value=2.4) 28 7.8
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 148 bits (358), Expect = 6e-36
Identities = 85/224 (37%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Frame = +3
Query: 135 DKNA-RDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDN 311
+KN R+ A A+ N G G+QIWRI+ F+ +++D G FY GDSYIIL T ++
Sbjct: 455 EKNVKREAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKES 514
Query: 312 -RNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 488
+ L +D+H+WIG++STQDE G AA TV LD +QHRE G ES LF SYF++
Sbjct: 515 GEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS 574
Query: 489 PLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLD 662
L L+GG SGF HV + R+ +V+G + V +V +S+ DVF+LD
Sbjct: 575 -LTILKGGVDSGFRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKG 632
Query: 663 NDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKYS 794
++Y++VG K EK + + +++ + +G+ + ++ D+ S
Sbjct: 633 LNLYLWVGVKCDKDEKFRGMQEILKIK-SERNGKPKSEVNDESS 675
Score = 83.8 bits (198), Expect = 1e-16
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Frame = +3
Query: 240 VAQKDIGKFYKGDSYIILRTTSD-NRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKF 416
V + D GKFY GDSYIIL T D + L +D+H+WIG++STQDE G AA TV LD
Sbjct: 880 VLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIYP 939
Query: 417 GGAAVQH----RETMGHESALFLSYFQTPLNYLEGGNPSGFNHV---VTNAGAQKRMFQV 575
V+ R+++ + L +T + G+ F V V++A Q ++ ++
Sbjct: 940 KSVKVEEVPFVRKSLNSDDVFILDKGKT---IYQKGDYDDFEPVLLRVSDASGQMKLTEM 996
Query: 576 KGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDH 755
K K R+ + D ++ DVF+ D N ++V+ G KA E+ A+ + +
Sbjct: 997 K-KGKGRITRND-----FDEKDVFLFDTGNVLFVYSGNKASIDERRLALQIGTNYLNGTN 1050
Query: 756 H 758
H
Sbjct: 1051 H 1051
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 122 bits (293), Expect = 5e-28
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Frame = +3
Query: 120 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 299
++ ++ + + A+ A+ N G G+QIWRI F+ ++ G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 300 TSDNRNN--LSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFL 473
+ + L +D+H+WIGR STQDE G AA TV LD VQHRE M HES +F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 474 SYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRD 590
+YF++ + YL+GG +GFN V + R+ +V G ++
Sbjct: 616 TYFKS-ITYLKGGAETGFNQVKPKE-YKPRILKVSGDKN 652
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +3
Query: 606 VDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD 785
V+ S+NKGDVF+LD +IY + G + VE++K I A ++RD++ GR +V I+D
Sbjct: 48 VELHYKSLNKGDVFILDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIID 107
Query: 786 K 788
+
Sbjct: 108 E 108
Score = 51.2 bits (117), Expect = 1e-06
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Frame = +3
Query: 162 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT----TSDNRNNL-- 323
V AF G+ G++IWRI+ + + K G FY GDSYI L S N+ ++
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 324 ---SWDIHYWIGRESTQDESGAAAILTVGL-DDKFGGAAVQHRETMGHESALFLSYFQTP 491
+I+ W G + ++ E + + D++ GG A H + L +F
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESKFFDAL 122
Query: 492 LNYLEGGNPSGFNHVV---TNAGAQKRMFQVKGKRDVRVRQVDP-QIASMNKGDVFVLDL 659
+ E G + A + M G+ ++R + P + ++++ D F+LD
Sbjct: 123 GSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILDC 182
Query: 660 -DNDIYVFVGEKAKNVEKLKAI 722
+ ++V+VG+ EK A+
Sbjct: 183 GSSGVFVWVGKGCTKNEKSAAM 204
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 186 GRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQ 365
GR+ V +R+ + + G F+ GDSY+++ T R I++W G +S
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 366 DESGAAAILTVGLD-DKFGGAAVQ 434
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
Score = 30.7 bits (66), Expect = 1.5
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Frame = +3
Query: 228 EPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLD 407
+ + VA D D+++++ NN S I W G+ ST DE AA ++
Sbjct: 235 DAVQVAGVDASYLNSNDTFVLI-------NNSSTII--WKGKGSTGDEVEAAKEAAKIIN 285
Query: 408 DKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGA-QKRMFQVKGK 584
+ G E G E+ F L G P N ++ ++ A + R+F K
Sbjct: 286 PQGGDNYDLFEE--GREATKFWEI-------LGGKKPYANNILLQSSEAPEPRLFHCYNK 336
Query: 585 R-DVRVRQ-VDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVE 707
R + V + V+ + DV +DL + IY++VGE+AK E
Sbjct: 337 RGSLEVEEIVNFGQDDLVDDDVMFVDLGDHIYMWVGEEAKKSE 379
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 135 DKNAR-DKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 299
+KN + + A+ PA+ G+ GVQ+WRI F+ ++D G FY GDSYI+L T
Sbjct: 347 EKNVKKESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 621 ASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQ 737
+ +N DVF++D + YV+ G+ + E+ +A+ FA++
Sbjct: 594 SQLNTNDVFIMDSGDHCYVWSGKGSSVDERRRAMEFAHR 632
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/134 (29%), Positives = 61/134 (45%)
Frame = +3
Query: 291 LRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 470
L+T D + L W I+YWIG+E++ RE G ES F
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEAS-------------------------REEQGDESEEF 294
Query: 471 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFV 650
F + Y+EGG SGF + V + R+F++ + V + V P ++S++ F+
Sbjct: 295 HELFDNDIAYIEGGTASGF-YSVEDQIYITRLFRLLKDKRVLLEPVLPDVSSLDPTFTFI 353
Query: 651 LDLDNDIYVFVGEK 692
LD IY++ G K
Sbjct: 354 LDAGLKIYIWSGAK 367
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 579 GKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQV---RDQ 749
G+R+++ R ++P S N GD +VL ++++ +VG+ A +E+ K A+++ R+
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAKVTEIASRIFTKREL 1516
Query: 750 DHHGRGRVDIVDK 788
D R V + +K
Sbjct: 1517 DCKARDIVFVEEK 1529
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +3
Query: 180 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDNRNNLSWDI 335
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 336 --------HYWIGRESTQDESGAAAILTVGLDDKFG 419
+W G + T +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +3
Query: 612 PQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKY 791
PQI+ ++ +V V D +++YV+ G+++ + ++ + Q+ + G G D + Y
Sbjct: 1598 PQISLLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQLYESSFKGHGPYDPIYPY 1657
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 264 FYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDK-FGGAAVQHR 440
FY GDSY+IL D N +H G+ ++ DE AA + +DD+ FGG A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 441 ETMGHESALF 470
+ E F
Sbjct: 737 QVCCREKVQF 746
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +3
Query: 180 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDNRNNLSWDI 335
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 336 --------HYWIGRESTQDESGAAAILTVGLDDKFG 419
+W G + T +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +3
Query: 612 PQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKY 791
PQI+ ++ +V V D +++YV+ G+++ + ++ + Q+ + G G D + Y
Sbjct: 43 PQISLLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQLYESSFKGHGPYDPIYPY 102
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 330 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 488
++H+W+G E + +E AA V L K G VQ+RE G+E+ F FQ+
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 339 YWIGRESTQDESGAAAILTVGLDDKFG-GAAVQHRETMGHESALFLSY 479
+W G +ST +E GAAA++TV +D + G +H T+ + F Y
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIY 244
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 339 YWIGRESTQDESGAAAILTVGLDDKFG 419
+W G +ST +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 432 QHRETMGHESALFLSYFQTPLNYLEGGNPSGFN---HVVTNAGAQKRMFQVKGKRDVRVR 602
Q R E FL F+ L LEGG +GF T KRMF VKG D+ +
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGFRAGCEEDTYDHEGKRMFHVKGTTDLNAK 97
Query: 603 QVDPQI 620
+ ++
Sbjct: 98 AIQKRL 103
>SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17)
Length = 488
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 555 QKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLD--NDIYVFVGEKA-KNVEKLKAI 722
+KR + VKG DVR R P S+ D V+DL+ ND+ ++ A + V++L ++
Sbjct: 88 RKRRYHVKGSNDVRKRSGSPS-GSITTDDESVVDLNDINDLQLYDEPNAVQGVDRLSSM 145
>SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025)
Length = 1266
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 427 RSSTERPWVTKALCSYHISRHP*TIWREGIRPVLTTSSRTREPRNECSRSRGSEMSALDK 606
R + +P+V++ +P T+ GIRP+L +S+ PR + R+ G+ S D
Sbjct: 295 RPTENQPYVSRGPLEIQ-PHNPTTMQNAGIRPMLASSAGIALPRKQQKRNTGAPDSCGDA 353
Query: 607 S 609
S
Sbjct: 354 S 354
>SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 627 MNKGDVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQ 737
+ + DV++ D YV+VG+ A E+ A+++A+Q
Sbjct: 50 LKEDDVYIFDSGRHCYVYVGKAASIDERRNAMTYAHQ 86
>SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 354 PDRSSSGCPMTDCCDCPRSSVK*CMNLLCR--IFLCPSEQRVL 232
PD+ ++ P T C DCP M ++ R IF C E +VL
Sbjct: 57 PDKRTNTLPFTHCYDCPLIITSVYMGIMGRRGIFQCMLEVQVL 99
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 207 IWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRN--NLSWDIHY--WIGR 353
IWR+Q Q +IG + ++ SD R +LSW H+ W+ R
Sbjct: 160 IWRLQRARNSDSCQSEIGVNFNSRPQLVTNEKSDTRTCLSLSWLSHFSRWLPR 212
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 217 YRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTIATICHGTSTTGSV 351
Y N L++ + S KE++ F +P A +C G +T GSV
Sbjct: 150 YAEHNADTLVKYSLSPSAKELYFKF-SKPNEDAPLCQGAATAGSV 193
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 148 VTKLRSTRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEI 279
+T + RLL +A +P+ K R++N+Y ++ +N K I
Sbjct: 129 ITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNLLKNI 172
>SB_6995| Best HMM Match : DUF740 (HMM E-Value=2.4)
Length = 671
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 681 VGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKYS 794
V E +++++ L ++S +NQ D G VDI+DK S
Sbjct: 474 VAELSQSIKTLDSVSVSNQSMDPVDSLSGSVDILDKES 511
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,939,838
Number of Sequences: 59808
Number of extensions: 560193
Number of successful extensions: 1611
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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