Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0856
         (816 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5HW46 Cluster: Membrane protein, putative; n=11; Campy...    34   4.9  
UniRef50_A6LZB9 Cluster: Transcriptional regulator, TetR family;...    33   6.5  
UniRef50_Q228X2 Cluster: Mitochondrial carrier protein; n=1; Tet...    33   6.5  
UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1...    33   8.6  

>UniRef50_Q5HW46 Cluster: Membrane protein, putative; n=11;
           Campylobacter|Rep: Membrane protein, putative -
           Campylobacter jejuni (strain RM1221)
          Length = 318

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 454 IRF*EMRLKPQLYDLAGLPLKPDYRLLWSKNK*NLGTNLLAIR 582
           + F E  LK   ++L     KPD++L+W +++ NL  NL ++R
Sbjct: 271 LAFLESTLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLR 313


>UniRef50_A6LZB9 Cluster: Transcriptional regulator, TetR family;
           n=1; Clostridium beijerinckii NCIMB 8052|Rep:
           Transcriptional regulator, TetR family - Clostridium
           beijerinckii NCIMB 8052
          Length = 189

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -2

Query: 401 KVGKSLRILFFKFIYILHSKSFNSVSTHDRIDRLTIKHHTFCENLKTKRYVLLHYFTNN* 222
           +V K+ R +   FIY+L  K F  ++  D +DR  I   TF ++  T +Y L     N  
Sbjct: 7   RVIKTKRNIEESFIYLLGQKDFYKITVQDILDRALINRSTFYKHY-TDKYKLAETLCNEV 65

Query: 221 LD 216
            D
Sbjct: 66  FD 67


>UniRef50_Q228X2 Cluster: Mitochondrial carrier protein; n=1;
           Tetrahymena thermophila SB210|Rep: Mitochondrial carrier
           protein - Tetrahymena thermophila SB210
          Length = 1997

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 786 FYHRLFSIYFFLSP-IFILNSRYTHFSQHSYSLTIINMATYKQNRVI 649
           FY+ +  I FF+ P  F L  + T+  QH + +   N   YKQ +V+
Sbjct: 539 FYYSMSQIKFFVHPSYFYLQDQITYMKQHKFEIINNNPTYYKQFKVM 585


>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1.146;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
          Length = 4894

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
 Frame = -2

Query: 479  FNLISQKRMAGSTL*YLLISHIRIKKKVGKSLRILFFKFIYILHSKSFNSVSTHDRI--- 309
            +NLI++K +    L     +H    + + K  +I+   FI+    K+   +     +   
Sbjct: 4544 YNLINEKNLEEYLLILFFANHFNFFQNMIK-YKIILKLFIHNNLQKADELLGNKSMVWNW 4602

Query: 308  DRLTIKHHTFCENLKTKRYVLLHYFTNN*LDFT*RDLNKSFYFNK--QHYFFKLNYIIIH 135
             R T K  T  E    K      +FTNN  D   + LNK  Y NK  Q+ FF  NY   +
Sbjct: 4603 YRNTGKIKTNIEEYLIKDISCKLFFTNNKQDQLLKKLNKFQYKNKYDQNNFFLKNY-YHN 4661

Query: 134  KYTHRF 117
            KY H +
Sbjct: 4662 KYNHNY 4667


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,656,956
Number of Sequences: 1657284
Number of extensions: 13486478
Number of successful extensions: 27102
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27087
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)