Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0856
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50309-1|AAG24137.1|  335|Caenorhabditis elegans Seven tm recept...    28   7.0  
Z83233-11|CAB05757.2|  292|Caenorhabditis elegans Hypothetical p...    28   9.2  
AL023838-3|CAA19503.1|  108|Caenorhabditis elegans Hypothetical ...    28   9.2  

>U50309-1|AAG24137.1|  335|Caenorhabditis elegans Seven tm receptor
           protein 129 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 22/76 (28%), Positives = 36/76 (47%)
 Frame = +2

Query: 383 EDFFQLFF*SLYD*SKDIITWIQPSAFER*G*SLNCMI*RAYRLNRITDCFGAKISRTLV 562
           +DFF+     LYD   D I+++ P  F R     +C+        R +D  GA IS  ++
Sbjct: 159 KDFFRNITMQLYDEDIDKISFMGPLYFTR-NEDGSCLF-------RFSDLLGATISCVIM 210

Query: 563 PICLQYALQIIHMSYQ 610
            ICL   +   + +Y+
Sbjct: 211 TICLMTCVICAYKTYK 226


>Z83233-11|CAB05757.2|  292|Caenorhabditis elegans Hypothetical
           protein K06B4.9 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 179 NKQHYFFKLNYIIIHKYTHRFKWLFVNPNQLYL 81
           N  H    LN   +  + HR++ LF NPN + +
Sbjct: 91  NLSHLLIALNRFCVLFFQHRYEQLFSNPNTVIM 123


>AL023838-3|CAA19503.1|  108|Caenorhabditis elegans Hypothetical
           protein Y43C5A.3 protein.
          Length = 108

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 745 NFYIKFTLYSFQPTFVFANDYKHGNL*TKPCYIVTYGFNIF 623
           N+Y  ++ YS+ P++ + N+Y +GN      Y   YG+N F
Sbjct: 42  NYYPSYSSYSYYPSYGY-NNYGYGNYGGYGGY-NNYGYNSF 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,067,821
Number of Sequences: 27780
Number of extensions: 346314
Number of successful extensions: 756
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)