Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0855
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1461 - 27299891-27301870                                         30   2.4  
11_01_0051 + 391254-391343,391460-391862,392345-392352,393627-39...    29   3.2  
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716...    29   3.2  
06_01_1138 - 9429447-9433868                                           29   4.2  
08_01_0764 - 7332969-7333870,7334044-7334369,7334712-7335384,733...    28   9.7  

>08_02_1461 - 27299891-27301870
          Length = 659

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -2

Query: 634 LLHGRNRQGGGTHPRGLTRGPTTSKI 557
           LL GR R GGG H RGL   P  S++
Sbjct: 290 LLRGRRRGGGGGHRRGLFVFPLVSRM 315


>11_01_0051 +
           391254-391343,391460-391862,392345-392352,393627-393704,
           395371-395763
          Length = 323

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +2

Query: 500 QPLNKLGPVILGFERD--QGANLTGGRTSCESARVGTTTLPISAVKQ*CVFGLKGGAAVV 673
           QP  +L P++LG +RD     N++  +     A V     P++  K   V+ LK G+AV 
Sbjct: 154 QPTRELAPILLGQKRDAYTSLNMSKVKKMFLGAYVPLFEKPVAGTK---VYKLKYGSAVQ 210

Query: 674 TILE 685
            +L+
Sbjct: 211 VVLQ 214


>04_03_0988 -
           21469811-21469831,21470823-21471047,21471327-21471634,
           21471864-21472234,21472327-21472430,21473086-21473325
          Length = 422

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -2

Query: 766 PDVKWLLEPIDIPNVNAPPTLRYKF*GLKYSNDGCPTLQTENALLLHG 623
           P +  L EPI +  VNA    +Y+  G KY  DG PTL     L +HG
Sbjct: 86  PVLAGLSEPIIVAKVNAD---KYRKLGSKYGVDGFPTLM----LFIHG 126


>06_01_1138 - 9429447-9433868
          Length = 1473

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +1

Query: 544 RSRCQSYWW*DLL*VRAGGYHHPAYFCREAVMRFRFEGWGSRRY 675
           R RC+  WW   L  R    HH A   RE   R R  G    RY
Sbjct: 97  RGRCRCLWWASWLVHRVVAQHHAATRLRELKERARDVGERRIRY 140


>08_01_0764 -
           7332969-7333870,7334044-7334369,7334712-7335384,
           7336195-7336219
          Length = 641

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 79  PALNLFFKVTLPFGCSMSY 23
           P+   FFKV LPFGCS  Y
Sbjct: 408 PSTEYFFKV-LPFGCSQGY 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,783,592
Number of Sequences: 37544
Number of extensions: 437149
Number of successful extensions: 916
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)