Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0855
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    28   6.6  

>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
            F31E3.4 protein.
          Length = 1131

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 376  TITKFHIVNKQTFRNVTNLRYVTQRMLSCLYTSPGVYNENI 254
            T+   H+   Q    VT +R  TQRMLS  +    +  E I
Sbjct: 1016 TVLNVHVAESQIIDTVTLMRLGTQRMLSLQFLVKEILGETI 1056


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -3

Query: 732  SPT*MRHPP*DTSSKVSSIVTTAAPPFKPKTHYCFTAEIGRVVVPTRADSQEVLPPVRLA 553
            S T   H   +T+S     + T   P KPKT    T+     + P    S+ + PPV  A
Sbjct: 1378 STTVTEHIDAETNSATIPTIGTPPSPLKPKTKLGLTSH-PSAIPPWAISSKTLAPPV--A 1434

Query: 552  P*SLSKPRITGPN 514
            P +++ P    P+
Sbjct: 1435 PPTVTVPSNIAPS 1447


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,643,617
Number of Sequences: 27780
Number of extensions: 373817
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)