Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0855
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.9  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 365 VSHR*QTNIQKRDEPSIRYTTHAIL 291
           VSH  Q N+ K D  +++YT  A L
Sbjct: 667 VSHANQRNMYKLDLKNMKYTRSADL 691


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 658  TLQTENALLLHGRNRQGGGTHPRGLT 581
            T  T +++LLH ++   GG    G T
Sbjct: 1413 TSSTSSSILLHWKSGHNGGASLTGYT 1438


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 658  TLQTENALLLHGRNRQGGGTHPRGLT 581
            T  T +++LLH ++   GG    G T
Sbjct: 1409 TSSTSSSILLHWKSGHNGGASLTGYT 1434


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 646 ENALLLHGRNRQGGGTHPRGLT 581
           ENA+LL GR+++     P G T
Sbjct: 368 ENAMLLSGRSQKSTTGPPPGPT 389


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 72  RAGSLFSRTTSYFLLNRPNRIAIGVR 149
           R+ +L S+ T Y L     ++A+GVR
Sbjct: 132 RSSALASKATGYPLAYVAAKLALGVR 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,527
Number of Sequences: 438
Number of extensions: 5108
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)