Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0853
         (790 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                     130   2e-30
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                     109   3e-24
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                     102   4e-22
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)                 29   4.3  
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)           29   4.3  
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)                       29   4.3  
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.7  
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.7  
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)         28   9.9  
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score =  130 bits (313), Expect = 2e-30
 Identities = 62/202 (30%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
 Frame = +1

Query: 175 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 354
           S  S++  LA   L + G T  ++ K   FP D   +     ++ +  +  G ++ MAN+
Sbjct: 33  SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92

Query: 355 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPD 531
           ++   G ++ E F   S++ F++++  +D+ KN+  A+ ++N WVE+ T ++IK+L+   
Sbjct: 93  LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEG 152

Query: 532 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAA 711
             +  T   LVNA+YFKG+W   F+   T    F  +  + I+V  MY+  +++Y ES+ 
Sbjct: 153 MFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESST 212

Query: 712 LNAQLIEIPYKGDQSSLIVVLP 777
           L  Q++E+PY G++ S++V+LP
Sbjct: 213 LGCQIVELPYAGEKLSMVVLLP 234


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score =  109 bits (261), Expect = 3e-24
 Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 7/201 (3%)
 Frame = +1

Query: 199 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 366
           L  + L S G T  ++    G+ + +   T    K      L S  G  E+++ NK++ H
Sbjct: 5   LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64

Query: 367 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 543
           D  ++ E F   +R+ ++S++  +DF +K   A K +N WV + T   IK+L+    ++S
Sbjct: 65  DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVINS 124

Query: 544 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV--SKDKTIKVPMMYKRGDYKYGESAALN 717
            T  ++VNA+YFKG W  +F E  T    F+V  S +  I+V MM ++    +   A + 
Sbjct: 125 LTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKMKVNFYYDADIK 184

Query: 718 AQLIEIPYKGDQSSLIVVLPK 780
            +++E+PY GD ++++++LP+
Sbjct: 185 CRVVELPYSGDDTAMVIILPE 205


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score =  102 bits (244), Expect = 4e-22
 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
 Frame = +1

Query: 334 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 510
           E+ +AN +++     + + F  + +  +++D+  +D+  +   A K +N WVEE T  +I
Sbjct: 49  EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108

Query: 511 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDY 690
            DL+ P   +  T   LVNAIYFKG W   F +  +   +F  +    ++V MM+++  +
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168

Query: 691 KYGESAALNAQLIEIPYKGDQSSLIVVLP 777
           KY  S     +L+E+PY   Q S+++VLP
Sbjct: 169 KYLHSDKYKCKLLELPYVDTQLSMVLVLP 197


>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6489

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 3/199 (1%)
 Frame = -3

Query: 629  SRSLVSRSSNLELHAPLK*MALTRTAAVAELSESGLTKSLMRLLVFSSTQSLIDLAATVF 450
            S S+V   +   +  PLK   +  TAA    + + +  ++        T +    AAT  
Sbjct: 1089 SSSMVQAKAASSITTPLKTTVVAVTAAATTTAATTIAAAVTASTASVVTTTATVAAATTT 1148

Query: 449  FEKSMFWTSELKTSLETTAKXXXXXXXX*TYTLFAILSSTPLIDRRSRLLLANSVRIASS 270
             EK+   T+ +  +  T A          T T  A +++      ++  L A  V  A++
Sbjct: 1149 AEKATTTTAAMVKATTTAAAVTASTASVVTKT--ATVAAATTTAEKATTLTAAMVE-ATT 1205

Query: 269  SGKPIAFKSSSWVSPSEAKAN*ARGG---STENAERTTLFPGLFFTTSVNILAVKLSFPF 99
            +   +   ++S V+ +  KA         +T      T       TT+  I +  ++ P 
Sbjct: 1206 TAAAVTASTASVVTTTAEKATTTTAAMVEATTTEAAVTASTASVVTTTATIASSTITTPS 1265

Query: 98   LSTLERFVTAAIAAMAIVN 42
            LS +     +++   A  N
Sbjct: 1266 LSAISTTTASSVQVSAATN 1284


>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
          Length = 595

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = +1

Query: 1   GETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSA 180
           GE+  T    + C       +MAAV   + +L+  +      + + ++KNN  +S+   A
Sbjct: 17  GESNWTRCSPV-CKCAHIDKSMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGA 75

Query: 181 FSVLPPLAQLALASDG 228
           F+ L  L  L L+S+G
Sbjct: 76  FNGLDKLLTLDLSSNG 91


>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
          Length = 257

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 386 RILQSFPGTSSIRTSKTLISRRIQSQLS 469
           R+  SFPG S      TL++R  QSQ+S
Sbjct: 65  RLYDSFPGASRSEAESTLLARMRQSQVS 92


>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
          Length = 641

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 376 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 516
           K +E+  + S  +F+ + +N+DFS +     ++ DW   VE    N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507


>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 640

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 69  CHCRDGDSKQTNDCL 25
           CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350


>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2248

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
 Frame = +1

Query: 205  QLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLD 384
            Q+  +SD     + L  + F ++DA      SK    +    ++++   K+Y      +D
Sbjct: 703  QVTTSSDVNNALDELDEVQFSEEDARGIRGLSKDATFK----IKIEEKRKLYQISKAAVD 758

Query: 385  ENFAVVSRDVFNSDVQNIDFSKNTVA--AKSINDWVEENTNNRIKDLVNPDSLSSATAAV 558
             +      D F   ++  D S N+        +  +++N+N+ + D     +L    A V
Sbjct: 759  GDTGSKMADRFLEQLER-DPSANSDGRGTDEPSGHLDKNSNSEVSDETLEKTLK---ANV 814

Query: 559  LVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIK 660
              N    KG++S   D+   SD    +S DK++K
Sbjct: 815  QDNIKVTKGSFSDSSDKSSGSDNTDKMSSDKSVK 848


>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
          Length = 672

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 226 HQKLKLTEREEAAPKMPRGQRFSL 155
           HQ L + E + ++PK PR  +F L
Sbjct: 56  HQNLSINEMDSSSPKRPRQHQFGL 79


>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 345

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 226 HQKLKLTEREEAAPKMPRGQRFSL 155
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 226 HQKLKLTEREEAAPKMPRGQRFSL 155
           HQ L + E + ++PK PR  +F L
Sbjct: 50  HQNLSINEMDSSSPKRPRQHQFGL 73


>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 226 HQKLKLTEREEAAPKMPRGQRFSL 155
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 702 LSIFIIAAFIHHGYFDCF 649
           LS++++   +HH YF CF
Sbjct: 298 LSLYVVVVTVHHHYFFCF 315


>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 226 HQKLKLTEREEAAPKMPRGQRFSL 155
           HQ L + E + ++PK PR  +F L
Sbjct: 7   HQNLSINEMDSSSPKCPRQHQFGL 30


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,793,591
Number of Sequences: 59808
Number of extensions: 461965
Number of successful extensions: 1377
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)