Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0852
         (752 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19952| Best HMM Match : Peptidase_M24 (HMM E-Value=4e-05)          122   3e-28
SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   1e-08
SB_2578| Best HMM Match : No HMM Matches (HMM E-Value=.)               52   5e-07
SB_39958| Best HMM Match : SMF (HMM E-Value=1.2)                       32   0.43 
SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27)                 30   2.3  
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   3.1  
SB_30102| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_32281| Best HMM Match : LISCH7 (HMM E-Value=4.5)                    28   9.4  
SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  

>SB_19952| Best HMM Match : Peptidase_M24 (HMM E-Value=4e-05)
          Length = 173

 Score =  122 bits (294), Expect = 3e-28
 Identities = 65/155 (41%), Positives = 89/155 (57%), Gaps = 1/155 (0%)
 Frame = +3

Query: 243 MHLTANRAMLAHLKRGGLLQGDIEEMIRNGVNGILQPXXXXXXXXXXXXXXXXYLPNCPP 422
           MH  + R +L  L   G L+G+++EM+++ +  +  P                Y P    
Sbjct: 1   MHRLSVRVILEELTAAGFLRGEVDEMVKHHIGYLFMPHGLGHFMGIDVHDVGGY-PEGVE 59

Query: 423 RMTGP-LAKLRTARQLLAGMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFG 599
           R + P L  LR  R L   MVLT+EPG YFI  +L+ A  NPE S FFN   +E F+ FG
Sbjct: 60  RSSLPGLRSLRCGRVLEQNMVLTIEPGIYFIRPVLEPAFTNPEISHFFNREMIEDFLDFG 119

Query: 600 GVRIEDDVLITDDGVENLTFVPRTVQEIEEFMSNG 704
           GVRIEDD+++T DG+E +T VPRTV+EIE  M+ G
Sbjct: 120 GVRIEDDIVVTSDGMELMTCVPRTVEEIEALMAQG 154


>SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 506

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = +3

Query: 9   AATLHYGHAGTPNSKIIVDGDICLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVL 188
           A TLHY +    N++++ DGD+ L D G  Y GYA+DIT ++P NG FT  Q+ +Y+ VL
Sbjct: 327 ANTLHYIN----NTQVLRDGDLVLMDSGCEYHGYASDITRTWPVNGTFTGPQRELYDIVL 382



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +3

Query: 474 GMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITDDGVENL 653
           GMV+T+EPG Y       ++ N     R+   H +       G+RIEDD+LIT++G E L
Sbjct: 446 GMVVTIEPGLYI------NSNNKIIDKRY---HGI-------GIRIEDDILITEEGQEVL 489

Query: 654 TF-VPRTVQEIEEFM 695
           +   P+  +EIE+ M
Sbjct: 490 SAECPKDPKEIEKLM 504


>SB_2578| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 123

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = +3

Query: 519 LLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITDDGVENLTFV 662
           +L+ A  NPE SRF N   +E F+ FGG+R  DD+++T DG+E L FV
Sbjct: 1   ILEPALKNPEISRFLNRAMIEDFLDFGGLRFADDIVVTSDGME-LIFV 47


>SB_39958| Best HMM Match : SMF (HMM E-Value=1.2)
          Length = 231

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +3

Query: 90  GGNYAGYAADITCSFPANGKFTE--DQKLIYEAVLFARDAVIREAKPGVFWHEMHLTANR 263
           GGN   + A+   S+    K  E  + + IY+ +L + D++   A     W E H T   
Sbjct: 82  GGNVITHFAETVKSWMEELKIQEIPNTETIYKNLLASADSMTTLAIRPTIWGERHSTNLT 141

Query: 264 AMLAHLKRGGLLQGDIEEMIRNGV 335
            M++++  G    GDI   I  G+
Sbjct: 142 GMVSNILSGNTSLGDITAAICQGM 165


>SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +2

Query: 461 TTLSWNGTDCRAGLLFYTKIIGFGPKQPGAVSFLQLAQSRT 583
           T  SWNGT+  A   F  K +  GPKQ G VSF ++ ++ T
Sbjct: 143 TNESWNGTE-EAVRDFIHKNLKAGPKQAGDVSFERVHRTGT 182


>SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27)
          Length = 426

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 394 WEDICLTVLRG*LALWPNYAQP 459
           WED+C TVL   + LW  + +P
Sbjct: 102 WEDLCRTVLNKDMCLWDTFLRP 123


>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2202

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +3

Query: 261 RAMLAHLKRGGLLQGDIEEMI-RNGVNGILQ 350
           +AML  L+R GLL    EEM+ + GV+G++Q
Sbjct: 748 KAMLKDLQRQGLLSPQGEEMLNKQGVSGVVQ 778


>SB_30102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 69

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +3

Query: 36  GTPNSKIIVDGDICLFDMGGNYAGYAADITCSFPANGKFTEDQKLI---YEAVLFARD 200
           G P+ + + DGDI   D+   Y GY  D+  +F       E ++L+   YE ++ A D
Sbjct: 10  GIPDKRPLEDGDIVNLDITVFYNGYHGDLNETFFVGNVADEYKQLVKVTYECLMQAID 67


>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +3

Query: 36  GTPNSKIIVDGDICLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVLFARDAVIRE 215
           G PNS+ + +GD+   D+   Y G   D+ C     G   E  + + +    + D  I  
Sbjct: 120 GIPNSRCLQNGDLLSVDISLFYGGVHGDL-CETFLVGNVDESGRRLVDICRQSLDEAISI 178

Query: 216 AKPGV 230
             PGV
Sbjct: 179 CGPGV 183



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +3

Query: 606 RIEDDVLITDDGVENLTF 659
           + E+ VLIT+DGVE LTF
Sbjct: 196 QFEETVLITEDGVEVLTF 213


>SB_32281| Best HMM Match : LISCH7 (HMM E-Value=4.5)
          Length = 163

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +2

Query: 179 SCALCQRCRYKRS 217
           SCA+C+RCR KRS
Sbjct: 86  SCAVCKRCRNKRS 98


>SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1078

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 541 LFRAESNNLGIK*QPGSTVSTIPAKSCLAVRSLARGPVI-LGGQLGRYPPTSCTSSPNK 368
           +F  + NN G+  Q  +T ++ P K+C+ + + A   ++ +  +L     TSC ++P K
Sbjct: 102 IFVYDCNNAGLILQSFNTFASQPVKNCIQLAACAANQLLPMNPELPADLFTSCLTTPIK 160


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,128,495
Number of Sequences: 59808
Number of extensions: 467296
Number of successful extensions: 1108
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)