Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0851
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210...    30   2.4  
06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932...    29   3.2  
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    28   7.3  
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305     28   7.3  
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813...    28   9.6  

>08_02_1046 -
           23919990-23920183,23920251-23920479,23920624-23921057,
           23921426-23921567,23922163-23922255,23923132-23923245,
           23924181-23924266,23924458-23924506,23924717-23924783,
           23925550-23925665,23925698-23925821,23926465-23926553,
           23926810-23927061
          Length = 662

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +2

Query: 221 SMEVSKQVLDLNCTLRTLFTNLFKDRLPDGRTLVSMKVPLVLP-LEVRAYDDSAVIYCRL 397
           ++EV +Q+   +  L+   T+  KD  P    L    +PL+LP +  R    S   + RL
Sbjct: 505 NVEVGEQLKIASLGLKMFETHRSKDGCPCAYRLSYEGLPLLLPYISKRILCASPNDFLRL 564

Query: 398 LDYNTKNF 421
           L Y T NF
Sbjct: 565 LQYRTVNF 572


>06_03_1085 +
           27491735-27492754,27492854-27492978,27493088-27493232,
           27493328-27493591
          Length = 517

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +2

Query: 542 ARLDIQTVQQFLFYLQEAMFVKLQGLHFM-NAPSFMDRLLMILKPFMKKELIDMMVIHQI 718
           A+ D++   + +  L +  + +L   + + N P +      +  PFM +      VI + 
Sbjct: 314 AKKDLRVAMKQVLDLFQDNYPELVARNILINVPFWYYAFSTLFYPFMTQRTKSKFVIARP 373

Query: 719 G--SKTIGKYLPIEGLPKQAGG 778
              ++T+ KY+PIE +P + GG
Sbjct: 374 SKVTETLLKYIPIEAIPVKYGG 395


>04_04_0824 - 28399144-28399385,28400193-28400312,28400422-28400453,
            28400531-28400625,28400713-28400786,28400883-28401018,
            28401096-28401333,28401508-28401555,28401593-28401780,
            28401862-28401983,28402061-28402226,28402321-28402443,
            28403068-28403139,28403244-28403351,28404212-28404328,
            28404458-28404596,28404702-28404808,28404904-28405013,
            28405141-28405274,28405348-28405497,28405571-28405791,
            28405868-28406677,28410261-28410473
          Length = 1254

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = +2

Query: 434  AIKIVLMVIDLWQYQSGTW----PGLVIVIDLDKVTLSHLARLDIQTVQQFLFYLQEAMF 601
            A+  + M I    YQ   W     GL  +  LD   L    R   Q  Q+ +FY   +++
Sbjct: 910  AVSAITMKIGQKFYQVTMWLLLKTGLKSLSMLDWELLISFKRATGQKPQRIIFYRFLSLY 969

Query: 602  VKLQGLHFMNAPSFMDRLLMIL 667
              L+G HF      MD  L I+
Sbjct: 970  RNLRGQHFAGFYPCMDIFLTII 991


>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
          Length = 196

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = +2

Query: 14  HYIHIYLHKS*TMSQAVKAITLEDEYKKKTGITPEDVRKMRQWL 145
           H I  +  K+   ++  K +   ++ +KK   TPED+ ++ +W+
Sbjct: 101 HRIRNHARKAEMRTRMKKVLKALEKLRKKADATPEDIIQIEKWI 144


>02_02_0236 +
           8135641-8135795,8136167-8136557,8136640-8136931,
           8137117-8137271,8137363-8137451,8137623-8137967,
           8139046-8139169,8139424-8139581,8139673-8139757,
           8140094-8140306,8141314-8141375,8141466-8141951,
           8142472-8142568
          Length = 883

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 613 RPTFHECAIIHGP 651
           RP +HECA  HGP
Sbjct: 26  RPEYHECATCHGP 38


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,922,135
Number of Sequences: 37544
Number of extensions: 513881
Number of successful extensions: 1081
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)