Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0850
         (768 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2838| Best HMM Match : DUF436 (HMM E-Value=3.5)                     29   4.1  
SB_6538| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.5  
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)              28   9.5  

>SB_2838| Best HMM Match : DUF436 (HMM E-Value=3.5)
          Length = 422

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -1

Query: 465 RLSRTYVFLNM*HSVKSLVSLFFYNELLSILVSQRLRPLVNR 340
           R    Y++LN+    KSL+SL       S+ V Q LRPL  R
Sbjct: 31  RYKLIYLYLNLIRLTKSLISLRKAKTSNSLGVGQNLRPLERR 72


>SB_6538| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 927

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = -1

Query: 480 DFIEQR-LSRTYVFL---NM*HSVKSLVSLFFYNELLSILVSQRLRPLVN 343
           D++ +R  SRTY+ L   N+  S++ LVS+   + + + LV+   RPL+N
Sbjct: 505 DYLNKRNRSRTYLMLTRSNINSSLRQLVSMSTRSRVNNTLVNLSTRPLIN 554


>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
          Length = 2506

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 310  DHEREDVKAPSIDEGPQPLTNQNR 381
            D ERED+ A S+D  P PL +  R
Sbjct: 1213 DDEREDIGALSLDNEPMPLRHSAR 1236


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,126,280
Number of Sequences: 59808
Number of extensions: 373733
Number of successful extensions: 907
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)