Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0850
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64852-6|AAB04969.1|  359|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U41530-1|AAA83273.3|  636|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AF036693-3|AAO61431.1|  544|Caenorhabditis elegans Hypothetical ...    28   8.4  

>U64852-6|AAB04969.1|  359|Caenorhabditis elegans Hypothetical
           protein W01A11.2 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 166 ASPASRTRRGYREAPFKKYAIKFESDLVELFSIGTARNHNNY 41
           A P   T        F KYA+KF +DLV +++ G    +  Y
Sbjct: 218 AHPNKNTLTLINRRGFCKYALKFGADLVPMYNFGENDLYEQY 259


>U41530-1|AAA83273.3|  636|Caenorhabditis elegans Hypothetical
           protein SSSD1.1 protein.
          Length = 636

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 292 RDQRIANKRTKTFDKVNYIDH--VSCVGARCV 203
           RD++  N+ T TF KV ++DH    CV A  V
Sbjct: 245 RDKKRINQSTLTFKKVEHLDHGAYECVVANSV 276


>AF036693-3|AAO61431.1|  544|Caenorhabditis elegans Hypothetical
           protein C49A9.8 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +2

Query: 218 HARNVIYIINFIERFGAFICYPLIAIRDFTSITSEKTLKRHLLTRGRNL*LTKIDK 385
           H+RN+++I   +    +FI    I + DF S T +K +     T   N    KIDK
Sbjct: 248 HSRNIVFIFQEVLPEASFIFSNHIPVLDFPSPTFDKIIPIGGFTVKTNEKSLKIDK 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,048,325
Number of Sequences: 27780
Number of extensions: 286026
Number of successful extensions: 643
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)