Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0849
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72506-4|CAA96619.1| 590|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical pr... 29 3.9
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 29 3.9
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 29 3.9
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 29 3.9
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 29 3.9
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 29 3.9
AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion transpo... 29 3.9
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 29 3.9
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 29 3.9
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 29 3.9
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 29 3.9
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 29 3.9
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 28 9.1
>Z72506-4|CAA96619.1| 590|Caenorhabditis elegans Hypothetical
protein F07A5.3 protein.
Length = 590
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 503 INVKFQCYSVLCYKAFT*IY*PHNTIVIKNLQLLNPTETPL 381
I + F + ++ + AF+ IY +T+VIKNLQL ++T L
Sbjct: 17 IAIVFIVFGIVTWAAFSSIY---STLVIKNLQLTENSDTSL 54
>Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical
protein K12G11.1 protein.
Length = 749
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +1
Query: 634 PDVIDKIYLLDVHVYYNIYMQIIGRLVEIFL*KKQRKILVIYQQIAVPI-------HSTN 792
PD++ + +++D + I + + L EIF ++R ILV + P+ H N
Sbjct: 642 PDILSRHFVIDCSGFTFIDLMGVSALKEIFSDMRKRGILVYFANAKAPVREMFEKCHFFN 701
Query: 793 FTLKSN 810
F K N
Sbjct: 702 FVSKEN 707
>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform f protein.
Length = 1418
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion
transporter SULP-4 protein.
Length = 749
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +1
Query: 634 PDVIDKIYLLDVHVYYNIYMQIIGRLVEIFL*KKQRKILVIYQQIAVPI-------HSTN 792
PD++ + +++D + I + + L EIF ++R ILV + P+ H N
Sbjct: 642 PDILSRHFVIDCSGFTFIDLMGVSALKEIFSDMRKRGILVYFANAKAPVREMFEKCHFFN 701
Query: 793 FTLKSN 810
F K N
Sbjct: 702 FVSKEN 707
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans
voltage-dependent calcium channelalpha13 subunit
protein.
Length = 1837
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 411 KVLNYNCIVWSIYLRECFIAQ 473
KV N +CI W+IY EC + Q
Sbjct: 363 KVTNDSCINWNIYYNECQVMQ 383
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 368 HLLKLPVRHLLYPDGTITNL*TTYHIL 288
HL PVRHL+Y IT+L TY ++
Sbjct: 210 HLSDEPVRHLMYLCDEITDLKGTYELM 236
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 368 HLLKLPVRHLLYPDGTITNL*TTYHIL 288
HL PVRHL+Y IT+L TY ++
Sbjct: 210 HLSDEPVRHLMYLCDEITDLKGTYELM 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,736,739
Number of Sequences: 27780
Number of extensions: 396479
Number of successful extensions: 744
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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