Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0849
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.8  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   7.7  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   7.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   7.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   7.7  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 688 KYYSKHVHLVNIFYL*HQDIYFSLLLSLDVI 596
           +YYS +V   ++ YL  Q +  +  L +DVI
Sbjct: 461 EYYSHYVAFKSLSYLKKQPVIANGSLEVDVI 491


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNKSLNYLSYIVTI 280
           YNK L Y +YI+ I
Sbjct: 100 YNKKLYYKNYIINI 113


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNKSLNYLSYIVTI 280
           YNK L Y +YI+ I
Sbjct: 111 YNKKLYYKNYIINI 124


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNKSLNYLSYIVTI 280
           YNK L Y +YI+ I
Sbjct: 341 YNKKLYYKNYIINI 354


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNKSLNYLSYIVTI 280
           YNK L Y +YI+ I
Sbjct: 336 YNKKLYYKNYIINI 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,909
Number of Sequences: 438
Number of extensions: 5045
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)