Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0849
         (811 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g03550.1 68417.m00486 glycosyl transferase family 48 protein ...    32   0.52 
At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-g...    30   2.1  
At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ...    30   2.1  
At2g36850.1 68415.m04519 glycosyl transferase family 48 protein ...    28   6.4  

>At4g03550.1 68417.m00486 glycosyl transferase family 48 protein
           contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1780

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 652 IYLLDVHVYYNIYMQIIGRLVEIF 723
           IYL+D+ ++Y IY  I+G +V +F
Sbjct: 552 IYLMDIQIWYAIYSSIVGAVVGLF 575


>At4g04970.1 68417.m00722 callose synthase, putative /
           1,3-beta-glucan synthase, putative similar to callose
           synthase 1 catalytic subunit GI:13649388 from
           [Arabidopsis thaliana]
          Length = 1768

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +1

Query: 652 IYLLDVHVYYNIYMQIIGRLVEIF 723
           +YL+D+ ++Y+IY  ++G  + +F
Sbjct: 543 VYLMDLQIWYSIYSSLVGATIGLF 566


>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
           similar to glucan synthase GB:AAD11794 [Filobasidiella
           neoformans var. neoformans]
          Length = 1931

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 652 IYLLDVHVYYNIYMQIIGRLV 714
           IYLLD+H++Y I+   +G L+
Sbjct: 748 IYLLDIHIFYTIFSAFLGFLL 768


>At2g36850.1 68415.m04519 glycosyl transferase family 48 protein
           contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1680

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +1

Query: 601 HQVIIIS*NIYPDVIDKIYLLDVHVYYNIYMQIIG 705
           H + I+S  ++  V+  IYL+D+H++Y +   IIG
Sbjct: 473 HALTIVS--LWAPVL-AIYLMDIHIWYTLLSAIIG 504


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,117,152
Number of Sequences: 28952
Number of extensions: 347794
Number of successful extensions: 590
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)