Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0848
(604 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0233 - 16061182-16061714,16062765-16063578 33 0.23
04_03_0781 + 19572795-19573540,19573906-19573956,19574179-195742... 32 0.40
02_05_0158 - 26362259-26362695,26363732-26363903 32 0.40
04_03_1017 + 21747044-21748051 31 0.53
01_01_1008 - 7987936-7988628,7988923-7989102 31 0.70
01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563 31 0.93
02_04_0307 - 21905897-21906490,21906581-21906722,21907116-219072... 30 1.2
04_01_0607 + 7955026-7955664 30 1.6
03_05_0214 + 22040356-22040886 30 1.6
03_03_0048 + 14065317-14065433,14065646-14065726,14066566-140669... 30 1.6
05_01_0296 - 2303344-2303395,2303732-2304180,2304287-2304355,230... 29 2.1
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 2.1
07_01_1092 + 10022230-10022575,10023264-10023410,10023935-10024038 29 2.8
05_05_0152 + 22762994-22763326,22763857-22763989,22764281-227643... 29 2.8
12_02_0846 - 23623624-23623784,23624076-23624258,23624601-236246... 29 3.7
09_06_0115 + 20944586-20945185 29 3.7
09_06_0037 + 20389976-20391016,20391103-20391723 29 3.7
05_06_0108 - 25620685-25621115,25621517-25621602,25621963-25622507 29 3.7
03_03_0164 - 14979364-14979479,14979613-14980102 29 3.7
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 29 3.7
02_03_0229 + 16617371-16617970 29 3.7
01_01_0326 - 2642408-2643607 29 3.7
01_01_0189 - 1640581-1640832,1640936-1641132,1641243-1641608,164... 29 3.7
11_01_0066 - 536281-537196,537397-537452 28 5.0
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 28 5.0
05_03_0637 - 16465433-16466242 28 5.0
12_02_1215 + 27070164-27070302,27070308-27071098 28 6.5
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 28 6.5
07_01_1021 + 8736032-8736106,8736336-8736374,8737362-8737493,873... 28 6.5
07_01_0973 - 8193002-8193261,8193388-8193485,8194117-8194401,819... 28 6.5
06_01_1138 - 9429447-9433868 28 6.5
05_03_0331 + 12488005-12488454,12488561-12489505 28 6.5
03_05_0811 - 27867228-27867701,27868313-27868497,27869123-27869393 28 6.5
02_05_0868 + 32342967-32343915,32344389-32344447 28 6.5
08_01_0489 + 4280063-4280476 27 8.7
06_03_0152 + 17287133-17287490,17288541-17288734,17289349-172895... 27 8.7
04_04_1041 - 30329037-30329102,30329199-30329352,30329606-303297... 27 8.7
04_03_0342 + 14648137-14648371,14648953-14649005 27 8.7
03_06_0467 + 34145126-34145187,34145403-34145759,34146161-341462... 27 8.7
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 27 8.7
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 27 8.7
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 27 8.7
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 232 PGLLPTPAWTPGPRRRHHLERPQI 161
PG LP+P P RRRHHL P +
Sbjct: 99 PGFLPSPPPPPSSRRRHHLGVPTV 122
>04_03_0781 +
19572795-19573540,19573906-19573956,19574179-19574251,
19574772-19574876
Length = 324
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 250 APYPRRPGLLPTPAWTPGPRRRHH 179
AP P+ P PTP TP PR HH
Sbjct: 120 APAPQPPTPTPTPTPTPTPRHHHH 143
>02_05_0158 - 26362259-26362695,26363732-26363903
Length = 202
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -3
Query: 329 CGLSKHGFGSRRGAMRLSLPAPLSPSCTISTAPRF-------ASDTSVDTRSTPPPPLRA 171
CG S H G + A+ +S A +P+ T S++P +SD +DT S+ P
Sbjct: 106 CGTSGHCSGGMKLAVTVSAAAATTPTPTASSSPPSTATPATPSSDPGMDTPSSTPDATTT 165
Query: 170 STDST*YATG 141
T +T +TG
Sbjct: 166 PTTTTTKSTG 175
>04_03_1017 + 21747044-21748051
Length = 335
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -3
Query: 260 SPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST 156
SP T T PR A+ T STPPPP AS D T
Sbjct: 246 SPDYTQMTPPRRAASPDY-TPSTPPPPRAASPDYT 279
>01_01_1008 - 7987936-7988628,7988923-7989102
Length = 290
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 9/46 (19%)
Frame = +3
Query: 165 CGRSKWWRRRGP------GVHAGVGSKPGRRGYGARRRE---WCGE 275
C RS WWRRRG G G G G +RRR W GE
Sbjct: 226 CSRSPWWRRRGEARVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGE 271
>01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563
Length = 412
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = -3
Query: 311 GFGSRRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST*YATG*R 135
G G GA+ L L AP S T + + A+ +V PPPP AS+ S+ A G R
Sbjct: 24 GGGGGGGALDLKLGAPTSWKTTTTVSAASAAPAAV----APPPPPPASSSSSAAAAGKR 78
>02_04_0307 -
21905897-21906490,21906581-21906722,21907116-21907247,
21907303-21907433,21908028-21908185,21908299-21908396,
21908511-21908631,21908748-21908965,21909230-21909429
Length = 597
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 290 AMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDS 159
A+ P PLSP+ + AP +D +V R PP P +TD+
Sbjct: 11 AITRRFPPPLSPTAVDAAAPLADTDVAV-ARRFPPLPAAVTTDA 53
>04_01_0607 + 7955026-7955664
Length = 212
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 171 RSKWWRRRGPG-VHAGVGSKPGRRGYGARRREWCG 272
RS+ WRR G G V A V RR RR W G
Sbjct: 164 RSREWRREGGGEVEAAVERAAARRAVERSRRRWRG 198
>03_05_0214 + 22040356-22040886
Length = 176
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 171 RSKWWRRRGPGVHAGVGSKPGRRGYGARRREW 266
R +WW+R G G H G G+ G RRR W
Sbjct: 48 RRRWWQR-GTGRHGGTGNDAG-TSQRWRRRRW 77
>03_03_0048 +
14065317-14065433,14065646-14065726,14066566-14066967,
14067131-14067199,14067278-14067360,14067503-14067555,
14067659-14067780,14068033-14068386,14068479-14068578,
14068663-14068895
Length = 537
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 299 RRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDS 159
R G P S +C TAPR +S T T + PPPP +T++
Sbjct: 160 RTGGCSSPTPRAASLACAAPTAPRPSSRT---TTTAPPPPSLPATEA 203
>05_01_0296 -
2303344-2303395,2303732-2304180,2304287-2304355,
2304539-2306546,2311181-2311425
Length = 940
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 138 LTSRVSRAICGRSKWWRRRG--PGVHAGVGSKPGRRGYGARRREWCGE 275
+ +R + A R WWRRRG +P RR + R+WC +
Sbjct: 103 IKNREAEAWERRKSWWRRRGTQQQQQQQPRGRPRRRKQEEKARKWCDD 150
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 238 RRPGLLPTPAWTPGPRRRHHLERP 167
RR G P P+ PGPR H ++RP
Sbjct: 24 RRKGRPPCPSSLPGPRHDHAVKRP 47
>07_01_1092 + 10022230-10022575,10023264-10023410,10023935-10024038
Length = 198
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 CPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASS--ATRTSRA 533
C ++ R G G T + + A AT CA RP +S+ A +T R+
Sbjct: 18 CESARGREGSGVAATATGRGVGARAAVATSSCAAALARPPPSSAGYAAKTPRS 70
>05_05_0152 +
22762994-22763326,22763857-22763989,22764281-22764362,
22764786-22764939,22765028-22765162
Length = 278
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 305 GSRRGAMRLSLPAPLSPSCTISTA-PRFASDTSVDTRST-PPPPLRAST 165
G R + + P P SPS + S A R S+ D ST PPPPLR T
Sbjct: 64 GLRHPLLSAAPPQP-SPSPSPSVAFVRLPSEAPADASSTGPPPPLRRLT 111
>12_02_0846 -
23623624-23623784,23624076-23624258,23624601-23624641,
23624746-23624910,23625808-23625885,23626024-23626169
Length = 257
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 189 RRGPGVHAGVGSKPGRRGYGARRREWCG 272
RRG G G G P RRGYG RR + G
Sbjct: 13 RRGYG---GRGRSPPRRGYGGRREQGSG 37
>09_06_0115 + 20944586-20945185
Length = 199
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = +3
Query: 171 RSKWW----RRRGPGVHAGVG-SKPGRRGYGARRREWCG 272
RS+WW RRRG V G G GR G G RR G
Sbjct: 107 RSRWWAWPWRRRGAVVIGGAGDGGGGRDGCGGSRRAGLG 145
>09_06_0037 + 20389976-20391016,20391103-20391723
Length = 553
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 168 GRSKWWRRRGPGVHAGVGSKPGRRGYGARRREWCGE*KPHRTTTTA 305
GR W RRR G GV + PG RG W HR A
Sbjct: 59 GRWWWTRRRRRGSPCGVAAVPGLRGLPVIGSMWLMTGLAHRKLAAA 104
>05_06_0108 - 25620685-25621115,25621517-25621602,25621963-25622507
Length = 353
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 320 SKHGFGSRRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPP 180
S+ G G+R+ L +P+ PS A RFAS + T +T PPP
Sbjct: 13 SRRGGGARQSPFFRDLASPI-PSHR--AASRFASSAAGPTAATTPPP 56
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 171 RSKWWRRRGPGVHAGVGSKPGRR 239
R +W +RRG GV +G G GRR
Sbjct: 64 RGQWQQRRGGGVGSGNGEARGRR 86
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 28.7 bits (61), Expect = 3.7
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = +3
Query: 186 RRRGPGVHAGVGSKPGRRGYGARRREWCGE*KPHRTTTTAKSMLRKSTAYGLA*RAAL*S 365
RRR G + G G G G + C E T+ + RK A A
Sbjct: 140 RRRRNGANGGGGGGGG----GDFDFDKCREAAREALRTSHEEFFRKERAASAAAAEEQLQ 195
Query: 366 EDRKECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASS 512
++ +E + + KGA+ET E D+ G++ R + SS
Sbjct: 196 KEEEEEKAAAQEAKKGALETLEEEDVAELEGSSKVRALRTKVMTKALSS 244
>02_03_0229 + 16617371-16617970
Length = 199
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = +3
Query: 171 RSKWW----RRRGPGVHAGVG-SKPGRRGYGARRREWCG 272
RS+WW RRRG V G G GR G G RR G
Sbjct: 107 RSRWWAWPWRRRGAVVIGGAGDGGGGRDGCGGSRRAGLG 145
>01_01_0326 - 2642408-2643607
Length = 399
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 442 ISASLCVSIAPFPIRSFDLGHSFLSSD 362
ISA C+S AP P+RS+ +G S+D
Sbjct: 86 ISAKFCMSFAPVPVRSWIVGVGGDSAD 112
>01_01_0189 -
1640581-1640832,1640936-1641132,1641243-1641608,
1641826-1642224,1642313-1642719,1642814-1642941
Length = 582
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 405 GKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRADYRRSRAGHKPDFARDT 584
GKG ++ +RE + A T T + R+S+ T+ S +Y S + + ++
Sbjct: 227 GKGGVQREREEESRLGASTLTSESTSKSSVEWRSSTVTKDSETEYPFSSSSRRSSSRWES 286
Query: 585 SAL 593
AL
Sbjct: 287 YAL 289
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 272 PAPLSPSCTISTAPRFASDTSVDTRSTP-PPPLRAST 165
P+P SP + P S T TR++P PPP+ +T
Sbjct: 225 PSPASPPPPSTATPPPPSPTPTTTRASPTPPPIPTAT 261
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 277 HSPHHSRLLAPYPRRPGLLPTPAWTPGPRRRHHLERP 167
+ P+H+ A YP P P+P+ +P HH E P
Sbjct: 98 YDPYHAPAAA-YPSYPSPNPSPSISPSSSFHHHPEPP 133
>05_03_0637 - 16465433-16466242
Length = 269
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -3
Query: 296 RGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLR 174
R + L+ P PL P S A AS +S ST PPLR
Sbjct: 100 RAHLNLTAPPPLPPPPPSSAAAAAASSSSA-ASSTSAPPLR 139
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 168 GRSKWWRRRGPGVHAGVGSKPGRRGYGARRREW 266
G S+W RRR P V A V S RRG+ RR W
Sbjct: 158 GWSRWQRRRRPFVEAVVTS-AARRGW-RRRGSW 188
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 271 PHHSRLLAPYPRRPGLLPTPA 209
PHH + P P++PG PTP+
Sbjct: 29 PHHHQQQPPPPQQPGSPPTPS 49
>07_01_1021 +
8736032-8736106,8736336-8736374,8737362-8737493,
8737848-8737892,8738450-8739157,8740679-8740807,
8741290-8741346,8742937-8742954
Length = 400
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 165 CGRSKWWRRRGPGVHAGVGSKPGRRGYGARRREW 266
CG WWR RG G+ P R G GA R W
Sbjct: 165 CGDGFWWRWRG----GTAGASPARGG-GAVGRRW 193
>07_01_0973 -
8193002-8193261,8193388-8193485,8194117-8194401,
8195559-8195773,8196549-8197058
Length = 455
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 272 PAPLSPSCTISTAPRFASDTSVDTRSTPPPP 180
P LSPS +TAPR A + + S PPPP
Sbjct: 65 PPSLSPSP--ATAPRAARQKPLPSPSPPPPP 93
>06_01_1138 - 9429447-9433868
Length = 1473
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 400 ELEKALSKHKEKQILNQMREQQHKDAP 480
++ KA++ HK K IL + Q H AP
Sbjct: 1424 KVRKAINAHKRKPILTHKKPQHHGPAP 1450
>05_03_0331 + 12488005-12488454,12488561-12489505
Length = 464
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 253 EGESGAGSESLIAPRRLPNPCLE 321
EG + G +I P RLPNP +E
Sbjct: 410 EGRNEVGEAGVIVPIRLPNPVIE 432
>03_05_0811 - 27867228-27867701,27868313-27868497,27869123-27869393
Length = 309
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 316 LESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQI 441
LE+ R+D REL +R+G ++ELE +L + K +Q+
Sbjct: 93 LEARARLDKAREL--RERLGLGSFGARAELESSLERAKLEQL 132
>02_05_0868 + 32342967-32343915,32344389-32344447
Length = 335
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 238 RRPGLLPTPAWTPGPRRRHHLERPQIAR 155
R+PG P P+ P P RR P +AR
Sbjct: 111 RQPGPAPAPSPAPAPPRRRMPSPPPVAR 138
>08_01_0489 + 4280063-4280476
Length = 137
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -1
Query: 283 GFHSPHHSRLLAPYPRRPGLLPTPAWTP----GPRRRHHLERP 167
G PHH+ +L P P P +L A TP GP+ L RP
Sbjct: 43 GGRGPHHNAVLLPQP--PVMLAAAAGTPEQGNGPKINAVLRRP 83
>06_03_0152 +
17287133-17287490,17288541-17288734,17289349-17289557,
17289640-17289742,17290128-17290291,17290554-17290692,
17290908-17291078,17291162-17291298,17291445-17291759,
17291906-17291965,17292372-17292511,17292691-17292788,
17292875-17293387
Length = 866
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = +1
Query: 256 GESGAGSESLIAPRRLPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEK 435
GE+ + LIA N C P +++ L F+ +GK+ ++ K + + +
Sbjct: 362 GEATVEAVRLIADHVKLNDCQLHPDSIEVFLSLRFDDDLGKDDTEEEKGKPKKNKRRQNQ 421
Query: 436 QILNQMREQQHKDA 477
++ Q+ +K A
Sbjct: 422 EVPKQLPVSDNKKA 435
>04_04_1041 -
30329037-30329102,30329199-30329352,30329606-30329733,
30329918-30330043,30330545-30330675,30331091-30331304,
30332056-30332061,30332216-30332246,30332410-30332867,
30332992-30333136,30333255-30333712,30336945-30337085,
30337146-30337158,30337611-30337636
Length = 698
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 299 RRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDS 159
R + R P + S ++T R + + TR+ PPPP+RA++ S
Sbjct: 88 RSRSYRRPYPGFIDDSAFMTTT-RPGGEAYMYTRAAPPPPVRAASTS 133
>04_03_0342 + 14648137-14648371,14648953-14649005
Length = 95
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 168 GRSKWWRRRGPGVHAGVGSKPGRRGYGARRREWC 269
G ++W RR G G HA + ++ G RR C
Sbjct: 9 GGARWHRRMGGGTHAAMSNRSGSIQRCGRRCRRC 42
>03_06_0467 +
34145126-34145187,34145403-34145759,34146161-34146248,
34146361-34146506,34146892-34146936,34147030-34147133,
34147225-34147361,34147651-34147761,34148455-34148664
Length = 419
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -1
Query: 262 SRLLAPYPRRPGLLPTPAWTPGPRRRHH----LERPQIARDTR 146
+R L P P P PAW P PRR +RP +A+ TR
Sbjct: 72 TRQLLPPPPPAAPSPAPAWQP-PRRAAEDAALAQRPVVAKKTR 113
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 263 LSPSCTI-STAPRFASDTSVDTRSTPPPPLRASTDST 156
L SC + +P ASD+S+ S+ PPP+ A+ +T
Sbjct: 82 LVSSCDAPAPSPAAASDSSIPPSSSSPPPVSAAVFTT 118
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 189 RRGPGVHAGVGSKPGRRGYGARRREWCG 272
RRG G G G P RRGYG R+ + G
Sbjct: 13 RRGYG---GRGRSPPRRGYGGRKEQGSG 37
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 272 PAPLSPSCTI-STAPRFASDTSVDTRSTPPPPL 177
P P+ P+ ++ S+ P ++ +S+ PPPPL
Sbjct: 88 PVPVPPAYSVTSSVPPYSMTSSLPPSPRPPPPL 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,411,211
Number of Sequences: 37544
Number of extensions: 374861
Number of successful extensions: 2099
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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