Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0848
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.4  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   1.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.4  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   7.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.6  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 298 RLPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQI 441
           RL   CL + +R+ L  +L     +  +    K  LEKA+   K +QI
Sbjct: 311 RLRGICLAARERLRLITDLQERSFVAADHRTAKRNLEKAIRASKRQQI 358


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 378 LSYPLIKEQLSMQVHTLWTF*AWIWQSSWC 289
           L Y L   Q+   +  L  F  W+W + WC
Sbjct: 508 LIYCLFSTQVCRMIKRLPPF-RWLWSTKWC 536


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = -3

Query: 302 SRRGAMRLSLPAPLSPSCTISTAP-RFASDTSVDTRSTPPPPLRASTDST*YAT 144
           S  G   L+ P+P     +   AP    S  S  T  +P P  RAS  S   AT
Sbjct: 707 SPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPIVAT 760


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 253  LAPYPRRPGLLPTPAWTPGPRRRHHLER 170
            +AP+P   G+ P  +    PRRR   +R
Sbjct: 1139 VAPFPATNGMAPPLSPILSPRRRRQAQR 1166


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 272 GVKASSHHDDCQIHA*KVHSVWTCIESCSL 361
           GVK +   D+  +H   +HS  T    CSL
Sbjct: 16  GVKPTDKGDNRTVHTLTIHSHMTVSLHCSL 45


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 295 RRLPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKAL 417
           R +P+P  +  Q+   H      Q +GKN L  ++  E+ L
Sbjct: 772 RIVPSPNQQQQQQHHHHHLQQQQQIVGKNTLYSRNSSERML 812


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,985
Number of Sequences: 2352
Number of extensions: 11729
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)