BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0847
(825 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 24 6.5
AJ302658-1|CAC35523.1| 145|Anopheles gambiae gSG7 protein protein. 23 8.6
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 23.8 bits (49), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 205 AGVKTVLILNNVFFCKSTFFI*CLKSYSAKK 297
A K V + VF+C S FI C +++ A K
Sbjct: 333 ATYKEVGLFVIVFYCMSLLFIICNEAHHASK 363
>AJ302658-1|CAC35523.1| 145|Anopheles gambiae gSG7 protein protein.
Length = 145
Score = 23.4 bits (48), Expect = 8.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 66 NNCLQCLIFRCIFLSRSRQAGFSWHGYDRQRY 161
+ CL+ ++ R L S A FS++ +D +Y
Sbjct: 83 DGCLKQMVARVTDLEASFYASFSYNCHDHDQY 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,131
Number of Sequences: 2352
Number of extensions: 12821
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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