Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0846
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 57 1e-08
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 57 1e-08
10_01_0066 + 848523-849269,849520-849741 55 8e-08
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 54 1e-07
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 53 3e-07
10_01_0065 + 845447-846187,846969-847193 50 2e-06
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 50 3e-06
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 49 4e-06
04_01_0350 - 4610444-4610668,4612181-4612969 46 5e-05
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 42 4e-04
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 42 4e-04
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 42 6e-04
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 42 6e-04
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 41 0.001
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 40 0.003
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 39 0.005
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 36 0.029
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 36 0.038
10_08_0636 + 19478723-19478869,19479984-19480212,19480321-194804... 31 1.4
06_03_0620 - 22803769-22804867,22804959-22805311 28 7.6
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFW 177
AQ+ LR++ ++GV PI KS +K R++EN+++FD+ L+ ED KI + KR S +
Sbjct: 246 AQVSLRWIYEQGVTPIAKSYRKERLKENLEIFDWELTDEDRLKISQIPQRKRVTAASLF 304
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRT-VGMSFW 177
AQ+VLR+ +Q+ V IPK+ K+ R++EN VFDF +S EDM K+ + +++ RT FW
Sbjct: 264 AQLVLRWGLQRNTVVIPKTSKEERLQENFAVFDFAISDEDMEKMRSIDRKYRTNQPAKFW 323
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 54.8 bits (126), Expect = 8e-08
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQI LR++ ++G V + K+ +NR++EN+D+FD+ L+ E+ +KI +++ GM F
Sbjct: 248 AQICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEEERDKISKLPQQRGLTGMQFVC 307
Query: 181 DH-PY 192
D+ PY
Sbjct: 308 DNGPY 312
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +1
Query: 4 QIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEK-RTVGMSFWQ 180
Q+ LR++ ++GV PIPKS K R+++N+++FD+ L+ ED KI ++K T F
Sbjct: 255 QVSLRWIHEQGVTPIPKSYNKERLKQNLEIFDWELTKEDRLKISQIPQKKIVTAARMFSP 314
Query: 181 DHPYYPFEKSD 213
D + + SD
Sbjct: 315 DGEFASVDLSD 325
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 QIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTV-GMSFWQ 180
Q+++++ +Q+G IPKS K RI+EN+ VF + + ED + EKR + G +
Sbjct: 282 QVLIKWALQRGTSVIPKSTKDERIKENMQVFGWEIPEEDFQVLCGIKDEKRVLTGEELFV 341
Query: 181 DHPYYPFEKSDQVHDN 228
+ + P++ + +V DN
Sbjct: 342 NKTHGPYKSASEVWDN 357
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQI LR+L ++G V + K+ + R++EN+D+F++ L+ E+ +I + + G+ F
Sbjct: 246 AQICLRWLYEQGDVLLVKTYNEKRMKENLDIFNWELTDEERERISQLPQLRGLPGLEFIS 305
Query: 181 DH-PYYPFE 204
DH PY E
Sbjct: 306 DHGPYKSVE 314
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/64 (34%), Positives = 41/64 (64%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQ+ LR++ ++G I KS K+R+ EN+ +FD+ L+++D +KI T + + T+ + +
Sbjct: 255 AQVCLRWVYEQGDCVIVKSFNKSRLRENLGIFDWELTNDDRHKISTLPEWRGTLDIFVHK 314
Query: 181 DHPY 192
PY
Sbjct: 315 TGPY 318
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEK 153
AQI LR++ ++G + S K+ R++ENID+FD+ LS ED KI + K
Sbjct: 257 AQISLRWIYEQGASMVTTSTKRERLKENIDIFDWQLSDEDRLKISQIPQHK 307
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQ+ LR+L ++GV + +S + R+++N+D+FD+ LS +D I + + G F
Sbjct: 262 AQVALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQRRACHGNYFVS 321
Query: 181 -DHPY 192
D PY
Sbjct: 322 PDGPY 326
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNK 129
AQ+ LR+ IQ G +PKSV + RI++N+DV+D+++ + + K
Sbjct: 241 AQVALRWNIQMGHSVLPKSVSEERIKQNLDVYDWSIPEDLLAK 283
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 1 AQIVLRYLIQKG--VVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSF 174
AQ+ L +++ +G VVPIP + K ++ NID NL+ +D+ +I + +E+ G
Sbjct: 296 AQLALAWVLHQGDDVVPIPGTTKIKNLDANIDSLKVNLTDDDLKEISSQVREEDVAGGRQ 355
Query: 175 WQDHPYYPFEKSD 213
+ +Y ++ +D
Sbjct: 356 YTSFAHYTWKYAD 368
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEK 153
AQ+ LR+ IQ G +PKS + RI+ENIDV+D+++ + K+ + +
Sbjct: 237 AQVALRWGIQMGHSVLPKSTHEERIKENIDVYDWSIPEDLFIKLSEIEQAR 287
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQ+ L + IQ G +PKSV + RI++NIDV+D+++ + + K + + G
Sbjct: 236 AQVALHWNIQMGHSVLPKSVTEERIKQNIDVYDWSIPEDLLVKFSEIKQVRLLRGDVIVN 295
Query: 181 DHPYY 195
H Y
Sbjct: 296 PHSVY 300
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQ+ LR+L ++G I KS + R+ EN+++FD+ L+ D +I + + G +
Sbjct: 260 AQVCLRWLHEQGDCIIVKSFNERRMRENLEIFDWELTDADRQEISALPEFR---GNRDFY 316
Query: 181 DHPYYPFEKSDQVHD 225
H P++ +D+ D
Sbjct: 317 VHESGPYKTTDEFWD 331
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSE 117
AQ+ LR+ +Q+G +PKSV + R++EN+D+F +++ E
Sbjct: 230 AQVALRWGLQQGQSVLPKSVSEARLKENMDLFGWSIPEE 268
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +1
Query: 7 IVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQDH 186
+ LR++ ++G I KS + R+ EN+D+ + L+ E+ +I + K + F DH
Sbjct: 248 VCLRWVYEQGDCLIVKSFDEARMRENLDIVGWELTEEERQRIAGIPQRKINRALRFVSDH 307
Query: 187 PYYPFEKSDQVHD 225
P++ D + D
Sbjct: 308 G--PYKSLDDLWD 318
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNK 129
AQ+ LR+ IQ G +PKS + ENID+FD+ + E M K
Sbjct: 178 AQVALRWGIQMGQSVLPKSDNEVWTRENIDIFDWCIPEELMAK 220
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 AQIVLRYLIQKG--VVPIPKSVKKNRIEENIDVFDFNLSSEDMNKI 132
AQ+ L +++ +G VVPIP + K +++NI LS ED+ +I
Sbjct: 264 AQLALSWVLHQGDDVVPIPGTTKVKNLDDNIGAVKVKLSKEDLKEI 309
>10_08_0636 +
19478723-19478869,19479984-19480212,19480321-19480414,
19480598-19480721,19480922-19481023,19481103-19481254,
19481353-19481446,19481642-19481827
Length = 375
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKI 132
+Q+ + + I KG +PIP +E+N+ + LS +++++
Sbjct: 313 SQVAINWCICKGTIPIPGVKTVRHVEDNLGALGWRLSPAEVSEL 356
>06_03_0620 - 22803769-22804867,22804959-22805311
Length = 483
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 85 IDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQDHPYYPFEKSDQVHDNP 231
+DV+ F L EDM I N E R G+ + P +P + S +D P
Sbjct: 310 MDVYMFGLFDEDMKSILPGNFE-RHWGIFTYDGKPKFPMDLSGHGNDKP 357
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,496,083
Number of Sequences: 37544
Number of extensions: 379478
Number of successful extensions: 910
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -