Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0846
(807 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 50 2e-06
SB_59249| Best HMM Match : zf-C2H2 (HMM E-Value=0.016) 35 0.068
SB_54320| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_52360| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_50181| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 35 0.068
SB_42604| Best HMM Match : DUF1196 (HMM E-Value=5) 35 0.068
SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 35 0.068
SB_14835| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_14424| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_10362| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 35 0.068
SB_263| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36) 35 0.068
SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085) 35 0.068
SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_47109| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_35729| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_28415| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_9256| Best HMM Match : PsiB (HMM E-Value=4.9) 35 0.068
SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_2372| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 35 0.068
SB_19613| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_10529| Best HMM Match : zf-C2H2 (HMM E-Value=0.0034) 34 0.12
SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011) 33 0.21
SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 33 0.21
SB_21608| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 32 0.63
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 32 0.63
SB_28986| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 31 1.5
SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032) 31 1.5
SB_13171| Best HMM Match : AT_hook (HMM E-Value=6.4) 31 1.5
SB_29934| Best HMM Match : Vicilin_N (HMM E-Value=1.4) 30 2.5
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 29 4.4
SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_21570| Best HMM Match : AT_hook (HMM E-Value=2) 29 4.4
SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058) 29 4.4
SB_22340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_6911| Best HMM Match : Ank (HMM E-Value=0) 28 7.7
SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 28 7.7
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 58.0 bits (134), Expect = 8e-09
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKR 156
AQI +R+ IQ+GV+ IPKSV RI+ N VFDF LS+EDM I N++ R
Sbjct: 242 AQICIRFQIQRGVLVIPKSVTPERIKSNFQVFDFELSAEDMATIEGLNRDWR 293
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRT 159
AQI++R+ +QKG IPKS + RI+EN VFDF++ DM I + RT
Sbjct: 270 AQILVRWSLQKGYACIPKSAQLERIKENAKVFDFSIDMADMELIDGLEENYRT 322
>SB_59249| Best HMM Match : zf-C2H2 (HMM E-Value=0.016)
Length = 236
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 107 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 152
>SB_54320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 117 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 162
>SB_52360| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 455
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 326 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 371
>SB_50181| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 503
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 374 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 419
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 605 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 650
>SB_42604| Best HMM Match : DUF1196 (HMM E-Value=5)
Length = 294
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 227 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 272
>SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 855
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 726 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 771
>SB_14835| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 382
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 253 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 298
>SB_14424| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 272
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 143 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 188
>SB_10362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 227 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 272
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKR--TVGMSF 174
A+++LR+ IQ+G +PKS ++ + +N L+ ++M I + +R T G +
Sbjct: 334 ARVLLRWGIQRGYPVLPKSTSRDHLHDNFSALGLVLTDDEMAAIKSITTRQRYLTQGWMY 393
Query: 175 WQDHPYYPFE 204
+ PF+
Sbjct: 394 AEGEYVDPFD 403
>SB_263| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 272
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 143 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 188
>SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36)
Length = 1092
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 963 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 1008
>SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085)
Length = 576
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 458 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 503
>SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1395
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 1003 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 1048
>SB_47109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 143 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 188
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 231 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 276
>SB_35729| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 237
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 108 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 153
>SB_28415| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 356
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 227 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 272
>SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 1443
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 1314 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 1359
>SB_9256| Best HMM Match : PsiB (HMM E-Value=4.9)
Length = 259
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 43 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 88
>SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1766
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 868 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 913
>SB_2372| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 414
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 285 QSQLRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 330
>SB_19613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 537 LKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
L++ GHVAR E L K ++ G ++ GKR +G R+ D +K
Sbjct: 465 LRWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLK 507
>SB_10529| Best HMM Match : zf-C2H2 (HMM E-Value=0.0034)
Length = 272
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
Q L++ GHVAR E + K ++ G ++ GKR +G R+ D +K
Sbjct: 143 QSQLRWAGHVARMPDERIPKKLLFGELQHGKRCKGGQKKRFKDTLK 188
>SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011)
Length = 634
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRWTDVVKEATNIRSRVP 382
+R L+++GHV R + + I +EGKR+RGR W +V++E + P
Sbjct: 557 RRRLRWYGHVQRST--SWIRWIRDFIIEGKRTRGRPRKNWHEVLREDLKLAGLTP 609
>SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 280
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRWTDVVK 412
+R LK+ GHV R E + K + GKR GR T W ++
Sbjct: 197 RRRLKWLGHVLRMGQERIPKTSALWTPIGKRKPGRPKTTWRRTIQ 241
>SB_21608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRWTDVVK 412
+R LK+ GHV R E + K + GKR GR T W ++
Sbjct: 44 RRRLKWLGHVLRMGQERIPKTSALWTPIGKRKPGRPKTTWRRTIQ 88
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 537 LKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRWTDVVK 412
LK+ GHV R E + K + GKR GR T W ++
Sbjct: 586 LKWLGHVLRMGQERIPKTSALWTSIGKRKLGRPKTTWRRTIQ 627
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 549 MQRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRW 427
+QR ++ GH R+ N+ + + + +GKR RGR W
Sbjct: 408 LQRRWRWIGHTLRKPATNITRQSLTWNPQGKRKRGRPRNTW 448
>SB_28986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 534 KYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRW 427
K GHV RQ EN + + EG+R +GR T W
Sbjct: 567 KMIGHVLRQGRENDCSVALTWTPEGRRKQGRPKTTW 602
>SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 255
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 549 MQRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
+++ L++ GHV R + + L + ++ + G R++GR R+ DVVK
Sbjct: 177 IEKNLRWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFKDVVK 223
>SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032)
Length = 426
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 549 MQRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
+++ L++ GHV R + + L + ++ + G R++GR R+ DVVK
Sbjct: 348 IEKNLRWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFKDVVK 394
>SB_13171| Best HMM Match : AT_hook (HMM E-Value=6.4)
Length = 188
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 549 MQRLLKYFGHVARQNPENLEKLIVVGHVE-GKRSRGRLPTRWTDVVK 412
+++ L++ GHV R + + L + ++ + G R++GR R+ DVVK
Sbjct: 110 IEKNLRWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFKDVVK 156
>SB_29934| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
Length = 290
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 546 QRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRWTDVVK 412
+R K GHV RQ EN + + EG+R + R T W V+
Sbjct: 206 RRRWKMIGHVLRQGRENDCSVALTWTPEGRRKQERPKTTWRRTVE 250
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKI 132
+Q+VLR+ I + V IP+S I N D +L+ ++ I
Sbjct: 557 SQVVLRWAIHQNVTVIPRSRNSRNIYLNFRSLDLSLNENEIEMI 600
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Frame = -1
Query: 507 NPENLEKL--------IVVGHVEGKRSRGRLPTRWTDVVKEATNIR 394
NPENL+ L + V EG+R + +++ DV+K ATN+R
Sbjct: 232 NPENLDALNDRLQRFQVSVQSPEGRREADQSSSKYKDVIKLATNMR 277
>SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2102
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDM 123
+Q+VL++ +++ V+ IP+S N I N + L S+ M
Sbjct: 1384 SQVVLKWALEQDVLVIPQSRTPNHIRTNFHLDHVQLDSKQM 1424
>SB_21570| Best HMM Match : AT_hook (HMM E-Value=2)
Length = 148
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 549 MQRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRW 427
+QR ++ H R+ N+ + + + +GKR RGR W
Sbjct: 81 LQRRWRWIDHTLRKPATNITRQSLTWNPQGKRKRGRPRNTW 121
>SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058)
Length = 339
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 182 SCQKDIPTVRFSLLNVPILFISSDDKLKSKTSMFSSMRFFLT 57
SC + +V F+ P++F +S L S TS S +R T
Sbjct: 254 SCPPPLNSVMFATSQPPVMFATSQPPLMSATSQLSHVRHLST 295
>SB_22340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 543 RLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRW 427
R +++ GHV R + + K+ + G+R GR T W
Sbjct: 45 RRMRWLGHVLRMDQRRIPKVALRWTPPGRRKPGRPKTTW 83
>SB_6911| Best HMM Match : Ank (HMM E-Value=0)
Length = 1961
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/34 (35%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = -2
Query: 800 KEDRRRLTAQ-IEGLYSKSRRSF*INFSVIRIYV 702
+ED+ +L+++ I+G+ SK+ I+FS+I++Y+
Sbjct: 1220 REDKIKLSSEKIDGIISKAFPKHLISFSIIKLYI 1253
>SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1124
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 40 VPIPKSVKKNRIEENIDVFDFN--LSSEDMNKIGTFNKEK 153
VP P+ VKKNR+ +N + N S ++ +GTF +K
Sbjct: 902 VPYPEGVKKNRVPDNGQPWSDNDPGSFRGVHALGTFASDK 941
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,816,215
Number of Sequences: 59808
Number of extensions: 445317
Number of successful extensions: 1115
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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