Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0846
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 67 1e-11
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 57 2e-08
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 37 0.015
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 6.8
U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical pr... 28 9.0
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQI+LR+ + G+ IPKSV RI EN+ VFDF L++E+++KI NK R V +S
Sbjct: 245 AQIILRWFVDSGLSAIPKSVTPQRISENLAVFDFQLTAEEISKIDGINKNWRIVDLSQRD 304
Query: 181 -DHPYYPF 201
DHP+ PF
Sbjct: 305 GDHPHCPF 312
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQI++R+L Q G+ IPKSV +RI ENI FDF LS EDM+ + + R F
Sbjct: 251 AQILIRHLTQHGISTIPKSVSPDRIVENISTFDFKLSDEDMHTLNSIETRTRLFIADFAV 310
Query: 181 DHPYYPFEKSD 213
HP++P + D
Sbjct: 311 KHPFFPHDDID 321
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQ++LRY + +G +PKS+++NRI+EN +VFDF+L+ ED+ K+ +R F
Sbjct: 246 AQVLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQDFMT 305
Query: 181 DHP 189
HP
Sbjct: 306 GHP 308
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTV 162
AQI LR+ IQ+ V +PKS R++EN +VFDF LS+EDMN + +F+ + R +
Sbjct: 217 AQICLRWSIQQNVPTVPKSTDCRRLKENTNVFDFELSAEDMNTLNSFSSQNRKI 270
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFWQ 180
AQI+LR+ + G+ IPKSV RI ENI V DF LS+E++ I N+ R V S
Sbjct: 245 AQIILRWFVDSGLSAIPKSVTPQRIIENISVIDFQLSAEEIQAIDGVNRGWRLVDPSPRD 304
Query: 181 -DHPYYPFEK 207
DH Y+ F +
Sbjct: 305 GDHKYFGFNE 314
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Frame = +1
Query: 1 AQIVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFW- 177
AQI+LR ++ G++ IPK+ R++ENI++FDFN+S+ ++N + + K+ FW
Sbjct: 248 AQILLRATVEMGIIVIPKTTNPERMKENINIFDFNISNAEVNLLEAHERTKQE--RLFWW 305
Query: 178 ---QDHPYYPF 201
DHP PF
Sbjct: 306 PNVADHPEDPF 316
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 7 IVLRYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRTVGMSFW 177
++L + +++ V +PKSV +RI EN V D L+ ED+ + ++ + + + W
Sbjct: 238 VLLAWALRQNVGIVPKSVTPSRIVENFKVIDIALTPEDIQSLTALDRGQHYIRCTGW 294
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 552 CMQRLLKYFGH-VARQNPENLEKLIVVGHVEGKRSRGRLPTR 430
C Q +FG+ V Q+ + E I + H+E K++R R P+R
Sbjct: 2048 CQQNSSCFFGYCVTPQDEIDREANIKIRHIEKKQTRRRQPSR 2089
>U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical
protein T20D4.9 protein.
Length = 459
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 423 PSTWLAIFLDFSFLPRDLQLLIFPSSQDFVGPRV 524
P WL I FS L +L ++PS + + P V
Sbjct: 263 PFCWLTIADTFSVLAHELMHFVYPSGTELLTPNV 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,066,114
Number of Sequences: 27780
Number of extensions: 339885
Number of successful extensions: 901
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -