Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0844
         (378 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.18 
SB_46036| Best HMM Match : PSRT (HMM E-Value=1)                        31   0.31 
SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)                    28   2.2  
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   2.2  
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)                  28   2.9  
SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)                 28   2.9  
SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.9  
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)                   27   3.8  
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.1  
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.1  
SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.1  
SB_16246| Best HMM Match : Penaeidin (HMM E-Value=3)                   27   5.1  
SB_8280| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.1  
SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5)                     27   6.7  
SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.7  
SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.8  
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.8  
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)                  26   8.8  
SB_51434| Best HMM Match : rve (HMM E-Value=0.0029)                    26   8.8  
SB_8786| Best HMM Match : rve (HMM E-Value=0.0029)                     26   8.8  
SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3)                 26   8.8  

>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 336

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -3

Query: 373 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHR 242
           R+ SR  R    +R P   R +R P P   S   R RS +PR R
Sbjct: 225 RSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRR 268


>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
          Length = 878

 Score = 31.1 bits (67), Expect = 0.31
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 352 RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRGFEISRKA 218
           R+ T  R+  T+ N R P P   S   R  S +PR R    SRK+
Sbjct: 543 RSYTSPRQRRTSPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSRKS 587


>SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)
          Length = 942

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 286 LSACCRERSETPRHRGFEISRKAYSLTNQYF 194
           +SACCR     P HR ++I  + +  T   F
Sbjct: 176 VSACCRRSLSYPLHRNWKICERVFEDTKALF 206


>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 311 VSRCAWAPGLCGGPDVPAHGS 373
           ++R  W+  LCGGPD+   GS
Sbjct: 108 ITRSWWSSRLCGGPDINDDGS 128


>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
          Length = 752

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 314 KHSASEADRAERLLPGALRDAPSPRFRNIKEGI-LFDES 201
           KH A+ A + +RL     +D P+ R   +KE + +F ES
Sbjct: 185 KHKATAAPKPKRLFKKTRKDGPTTRSAFVKEKVGVFSES 223


>SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
          Length = 520

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 314 KHSASEADRAERLLPGALRDAPSPRFRNIKEGI-LFDES 201
           KH A+ A + +RL     +D P+ R   +KE + +F ES
Sbjct: 95  KHKATAAPKPKRLFKKTRKDGPTTRSAFVKEKVGVFSES 133


>SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 281

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 347 HHRGPAPRHSEKHSASEADRAER 279
           H  GP+ RHS  H  +E++ A+R
Sbjct: 123 HKEGPSSRHSNVHELNESELAKR 145


>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
          Length = 428

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = -2

Query: 374 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPR 240
           +SR   H+DH     PR S  HS    D  ER   G   +    R
Sbjct: 208 RSRSLRHEDHDDA-TPRRSRSHSLRHEDEEERSPSGGRHEREDSR 251


>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 975

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +1

Query: 139 VMTLFALPASSYMIQERFKNIDSSKSMPSLIFRNRGDGASLSAPGSKRSALSAS 300
           V  LFA P S  +I     +     S    +  +RG G S SA    R  LS++
Sbjct: 388 VSDLFAKPGSPSVISAPISHSPHDHSSKDTLLTHRGTGESSSAADISRRPLSST 441


>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 586

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 341 RGPAPRHSEKHSASEADRAERLLPGALRDAPSPR 240
           R P  +HS    +  AD+  + +P A++ AP  R
Sbjct: 493 RQPMLQHSSGEESENADKENQEVPSAIKPAPKQR 526


>SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 341 RGPAPRHSEKHSASEADRAERLLPGALRDAPSPR 240
           R P  +HS    +  AD+  + +P A++ AP  R
Sbjct: 95  RQPMLQHSSGEESENADKENQEVPSAIKPAPKQR 128


>SB_16246| Best HMM Match : Penaeidin (HMM E-Value=3)
          Length = 555

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -3

Query: 325 GTARNTRRPKPTELSACCRERSETPRHRGFEISRKAYSLT 206
           GT      P  TEL+ACC   +    H G      AYS T
Sbjct: 334 GTLAPALSPSATELAACCDAAAVPALHLGGLFPYCAYSYT 373


>SB_8280| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 202

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 271 RERSETPRHRGFEISRKAYSLTNQYF*IF 185
           R+  ++P HRG  I R  +  T+QY  +F
Sbjct: 7   RDFHKSPYHRGVRIKRALFCFTSQYDFVF 35


>SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5)
          Length = 336

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -2

Query: 335 PAPRHSEKHSASEADRAERLLPGALRD--APSPRFRNIK 225
           P PR S K  A E +      P   RD  AP+PR R IK
Sbjct: 144 PIPRKSVKRMAQELEDNTIPPPPEYRDRPAPTPRARRIK 182


>SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 196

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 311 VSRCAWAPGLCGGPDVPAH 367
           V RC    GL GGP+ PAH
Sbjct: 45  VERCCRFEGLPGGPEDPAH 63


>SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 569

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 356 HQDHHRGPAPRHSEKHSASEADR 288
           H  HH     RH  KH+A  A R
Sbjct: 167 HPSHHHVTKSRHQTKHNAKHATR 189


>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 828

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 360 GTSGPPQRPGAQAQRETLGVRSRQ 289
           G  GPP RPG   Q+ T G R ++
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQR 152


>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
          Length = 765

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 356 HQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPRFR 234
           H+ H R  +PR     S  +  R++   P   RD+ S R R
Sbjct: 278 HRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRRR 318


>SB_51434| Best HMM Match : rve (HMM E-Value=0.0029)
          Length = 748

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = -3

Query: 301 PKPTELSACCRERSETPRHRGFEISRKAYSLTNQYF*IFLVSYNSMPVRQITSLLYFHFT 122
           P  T+L+ACC   +    H G      AY+    Y   +  +Y   P    T +  +  T
Sbjct: 461 PSATQLAACCDVAAVPALHLGGLFPCCAYAHAYTYAYTYTYTYTRQPPETNTPVAMYRDT 520

Query: 121 AL 116
            L
Sbjct: 521 LL 522


>SB_8786| Best HMM Match : rve (HMM E-Value=0.0029)
          Length = 946

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = -3

Query: 301 PKPTELSACCRERSETPRHRGFEISRKAYSLTNQYF*IFLVSYNSMPVRQITSLLYFHFT 122
           P  T+L+ACC   +    H G      AY+    Y   +  +Y   P    T +  +  T
Sbjct: 672 PSATQLAACCDVAAVPALHLGGLFPCCAYAHAYTYAYTYTYTYTRQPPETNTPVAMYRDT 731

Query: 121 AL 116
            L
Sbjct: 732 LL 733


>SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3)
          Length = 331

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -1

Query: 360 GTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTAVSKYQ 226
           G + PPQRP       T+ V   +     A S  +RPV  + +++
Sbjct: 23  GANAPPQRPKVHFWFSTIDVLLVEKLGYVAKSDNKRPVEILKRHK 67


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,277,540
Number of Sequences: 59808
Number of extensions: 247374
Number of successful extensions: 710
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)