Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0844
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 29 0.83
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 27 3.4
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 3.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 27 4.5
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 4.5
AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein. 27 4.5
AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast m... 27 4.5
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 26 7.8
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 26 7.8
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 26 7.8
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 26 7.8
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 26 7.8
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 26 7.8
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 0.83
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -1
Query: 360 GTSGPPQRPGAQAQRETLGVRS 295
GT+GP +RP AQ +R++ G+R+
Sbjct: 38 GTAGPSRRPTAQPRRQSGGIRT 59
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 368 REQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPRFRNIKEGILFD 207
+EQ H+ R H +++ + D A+ G+ D PSP R GI D
Sbjct: 289 KEQPHEQTIRHSIKEHIDRNRRVKKDDADYEYSGSEDDEPSPNNRGPSMGIRDD 342
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 368 REQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPRFRNIKEGILFD 207
+EQ H+ R H +++ + D A+ G+ D PSP R GI D
Sbjct: 289 KEQPHEQTIRHSIKEHIDRNRRVKKDDADYEYSGSEDDEPSPNNRGPSMGIRDD 342
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 368 REQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPRFRNIKEGILFD 207
+EQ H+ R H +++ + D A+ G+ D PSP R GI D
Sbjct: 289 KEQPHEQTIRHSIKEHIDRNRRVKKDDADYEYSGSEDDEPSPNNRGPSMGIRDD 342
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 368 REQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPRFRNIKEGILFD 207
+EQ H+ R H +++ + D A+ G+ D PSP R GI D
Sbjct: 289 KEQPHEQTIRHSIKEHIDRNRRVKKDDADYEYSGSEDDEPSPNNRGPSMGIRDD 342
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 356 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSPRFRNIKE 222
+ HH+ P P H H + + E++ ++ DAP + ++ E
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPETKPTHLVE 265
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 368 REQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPRFRNIKEGILFD 207
+EQ H+ R H +++ + D A+ G+ D PSP R GI D
Sbjct: 289 KEQPHEQTIRHSIKEHIDRNRRVKKDDADYEYSGSEDDEPSPNNRGPSMGIRDD 342
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 349 TTTEARRPGTARNTRRPKPTELSACCRERSETP 251
TTT +RP T T P+P E +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 367 VSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSET 254
V +++RT+ RRP T R P+ SA R++ ++
Sbjct: 26 VRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDS 63
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 344 HRGPAPRHSEKHSASEADRAERLLPGALRDAP 249
H GP E+H +E D E LL G L D P
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVP 288
>AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein.
Length = 203
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 322 TARNTRRPKP-TELSACCRERSETPRHRGFEISRKAYSLTNQY 197
T ++T+ P+ TE AC + SET + R F S + + QY
Sbjct: 157 TGKDTQAPEDWTESGACLIQNSETVQLRSFSTSVHSVNTNVQY 199
>AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform a
protein.
Length = 203
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 322 TARNTRRPKP-TELSACCRERSETPRHRGFEISRKAYSLTNQY 197
T ++T+ P+ TE AC + SET + R F S + + QY
Sbjct: 157 TGKDTQAPEDWTESGACLIQNSETVQLRSFSTSVHSVNTNVQY 199
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 26.6 bits (56), Expect = 5.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 331 RPGTARNTRRPKPTEL 284
RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 26.2 bits (55), Expect = 7.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 355 IRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRGFEISRKAYSLTNQYF*IFLVS 176
I TT + T + PK TEL R RG R LTN+ VS
Sbjct: 99 ISPTTNGVKHTTYAVVKTPKETELETTSENRGLMETRRGLSPERPDVDLTNR-----KVS 153
Query: 175 YNSMPV 158
+++ P+
Sbjct: 154 FSTAPI 159
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 26.2 bits (55), Expect = 7.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 355 IRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRGFEISRKAYSLTNQYF*IFLVS 176
I TT + T + PK TEL R RG R LTN+ VS
Sbjct: 162 ISPTTNGVKHTTYAVVKTPKETELETTSENRGLMETRRGLSPERPDVDLTNR-----KVS 216
Query: 175 YNSMPV 158
+++ P+
Sbjct: 217 FSTAPI 222
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 373 RAVSRDIRTTTEARRPGTAR--NTRRPKPTELSACCRERSETPRHRGFEI--SRKAY 215
R +D + ++ R + R N ++P+P + R+RS TP+ F RKA+
Sbjct: 8 RRTKKDYKKRSKQNRERSRRYSNCKKPQPLNKPSPVRDRSRTPKAPQFNCRQCRKAF 64
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 370 AVSRDIRTTTEARRPGTARNTRRPKPTELSA 278
+ S + T++ ARRP TA+ PT +A
Sbjct: 172 STSNGVATSSSARRPATAKRDTLAAPTSTAA 202
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 370 AVSRDIRTTTEARRPGTARNTRRPKPTELSA 278
+ S + T++ ARRP TA+ PT +A
Sbjct: 172 STSNGVATSSSARRPATAKRDTLAAPTSTAA 202
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 378 GAEP*AGTSGPPQRPGAQAQ 319
G + G SGPP RPGA Q
Sbjct: 205 GGDAPPGPSGPPGRPGAPGQ 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,921,132
Number of Sequences: 27780
Number of extensions: 181634
Number of successful extensions: 738
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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