Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0844
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   2.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   3.6  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   8.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   8.4  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 148 LFALPASSYMIQERFKNIDSSKSM 219
           LF L  S    QE+ KNI S K++
Sbjct: 10  LFLLAISDSQAQEKLKNIYSWKAL 33


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 11  RLTGTSIIFNAKSILMCSCMNNPKYY 88
           R+T  S+  +  + +  +C+ +PK Y
Sbjct: 878 RITSMSVTISLSASVTIACLFSPKLY 903


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
          protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 74 CSYSCTLKSI 45
          CSYSC  KS+
Sbjct: 22 CSYSCVNKSM 31


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -1

Query: 147 RHYYTFTSQPSVTITPTHRE*YFGLFIQLHIKIDFALKI 31
           R+   F  + +    P H + Y  +   LH +I  A+ +
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLHTRISTAIDL 339


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -1

Query: 147 RHYYTFTSQPSVTITPTHRE*YFGLFIQLHIKIDFALKI 31
           R+   F  + +    P H + Y  +   LH +I  A+ +
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLHTRISTAIDL 339


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -2

Query: 359 GHQDHHRGPAPRHSEKHSAS 300
           GH   H    P H   H+A+
Sbjct: 420 GHGHSHIHATPHHHHSHAAT 439


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,398
Number of Sequences: 438
Number of extensions: 2868
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)