Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0842
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   3.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.2  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   6.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 177 VPNARSASRDPMPSREQLRCP 115
           +PN+R  SR+   S  Q RCP
Sbjct: 79  LPNSRCNSRESSDSLVQPRCP 99



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 273 PPPQESLEPIPSDNMSVNGYQDLVQGPL 356
           PP +E+  P P D  + +  + + + PL
Sbjct: 47  PPEEEAASPTPGDVPTPSSPRSISEDPL 74


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 535 IADICSLVGVRSCISSAWEGLAFVAA 458
           IAD+C    +   + +AW G A V+A
Sbjct: 306 IADVCQKYKLWLHVDAAWGGGALVSA 331


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 546 REKNRASQFFNHLSAISESIPA 611
           RE+NR  Q  N  + + + IPA
Sbjct: 93  RERNRVKQVNNGFATLRQHIPA 114


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 757 LDPSAAPLYV-GLVFLLPILEHAVSVELAGVI 665
           L+ S   L+V G    LP+++ +V VE  GV+
Sbjct: 232 LEESWLDLFVLGAAQFLPLMDFSVLVEACGVL 263


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 757 LDPSAAPLYV-GLVFLLPILEHAVSVELAGVI 665
           L+ S   L+V G    LP+++ +V VE  GV+
Sbjct: 232 LEESWLDLFVLGAAQFLPLMDFSVLVEACGVL 263


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 595 PRVSRLWDGVSRCSRPGSV 651
           P +   W+GV   ++PG+V
Sbjct: 19  PELPEHWEGVLDATKPGNV 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,054
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)