BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0842 (829 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629... 53 3e-07 03_05_0954 - 29113938-29114024,29114277-29114444,29115156-291152... 45 6e-05 03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 30 2.0 03_05_1108 - 30458827-30459411,30459523-30459615 30 2.6 04_04_1383 - 33144047-33144603,33145554-33147129 29 6.0 04_04_0315 - 24331996-24332853 29 6.0 03_05_0744 + 27336697-27337131,27337329-27337787,27340852-273424... 28 7.9 >08_02_0850 + 21862110-21862394,21862555-21862723,21862901-21862965, 21863632-21863905,21863998-21864145,21864237-21864346, 21864440-21864495,21864568-21864624,21864733-21864876, 21865304-21865351 Length = 451 Score = 52.8 bits (121), Expect = 3e-07 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +2 Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQL-LSDLQAYVKQFHTTGLVW 814 +V+E +FY+N+VL ++K KD HVEW +A +L + L+ YVK F+ G VW Sbjct: 159 HVEESWQMAEFYSNKVLVEYKSKDPDHVEWAKALKELFVPSLRDYVKTFYPLGPVW 214 Score = 36.7 bits (81), Expect = 0.023 Identities = 25/101 (24%), Positives = 42/101 (41%) Frame = +3 Query: 318 SVNGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQAQSRYIQLAATKAKPSQAEEM 497 ++ + +LV G + + +IG +VA ++ AF + KP+ Sbjct: 44 AILAFDELVAGAVGRVSAAAGKIGAEVAEVTRVLEKAFLVGKDLLVRTKQTQKPTVDSIA 103 Query: 498 QLLTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620 + P +E I E R+S NHL A + S+ AL W Sbjct: 104 VFMGPLNETILEANSLAEGTRSSHG-NHLKAAAGSLAALAW 143 >03_05_0954 - 29113938-29114024,29114277-29114444,29115156-29115212, 29115314-29115369,29115463-29115572,29116142-29116310, 29116418-29116742,29117378-29117442,29117541-29117712, 29118191-29118484 Length = 500 Score = 45.2 bits (102), Expect = 6e-05 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Frame = +3 Query: 318 SVNGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQ-AQSRYIQLAATKAKPSQAEE 494 ++ Y + V G + +++IGG V ++ AF ++ R +Q + S A+ Sbjct: 47 AIVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPASMADA 106 Query: 495 MQLLTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620 P ++ I+ E R +FNH+ ++++S+ AL W Sbjct: 107 QDFFKPLNDVIAKAIAMTE-GRRPDYFNHIKSVADSLTALAW 147 Score = 45.2 bits (102), Expect = 6e-05 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +2 Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQL-LSDLQAYVKQFHTTGLVW 814 +V+E +FY N+VL +++ KD HVEW +A +L + L+ +VK+ + G W Sbjct: 163 HVEESWQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSW 218 >03_06_0476 + 34199577-34199638,34200267-34200397,34200535-34200698, 34201007-34201117,34201308-34201387,34201489-34201639, 34201736-34201829,34202421-34202509,34203672-34203745, 34203859-34204021,34204445-34204530,34205011-34205094, 34205186-34205366,34205837-34205887 Length = 506 Score = 30.3 bits (65), Expect = 2.0 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 63 ISLNTIGYFCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLERLP 206 +S + I CRF G E+ AA G + E + E +++ S+++RLP Sbjct: 457 LSEDLITEMCRFGGAEIHPVAAFIGGVASQEVIKELIKQ--SKIDRLP 502 >03_05_1108 - 30458827-30459411,30459523-30459615 Length = 225 Score = 29.9 bits (64), Expect = 2.6 Identities = 21/47 (44%), Positives = 24/47 (51%) Frame = -2 Query: 192 IAR*RVPNARSASRDPMPSREQLRCPRLRYQKNDKNIL*CLMRSLTV 52 +AR RV ARSA R PS L PRLR + I C +R L V Sbjct: 36 LARLRV--ARSAGRRAPPSFRSLSPPRLRTSASTATITPCRLRRLRV 80 >04_04_1383 - 33144047-33144603,33145554-33147129 Length = 710 Score = 28.7 bits (61), Expect = 6.0 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +2 Query: 416 RECCFSSAIPLHTTGGNKSQAFPS*GNAAS-DSDQRTDICYPAIS*KESR 562 REC S + H G N S A P AA+ D QR DI P S SR Sbjct: 277 RECRGSHLLFFHGPGNNGSAAPPVQSAAATGDGPQRDDISLPDSSTPRSR 326 >04_04_0315 - 24331996-24332853 Length = 285 Score = 28.7 bits (61), Expect = 6.0 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 685 H*PRAQGLEGERQDPRRVVPRLGPTAVRF 771 H P+A+ ++GERQ PR L +A+ F Sbjct: 55 HIPKAEAVQGERQSPRHGSMELSASALGF 83 >03_05_0744 + 27336697-27337131,27337329-27337787,27340852-27342418, 27342641-27343044 Length = 954 Score = 28.3 bits (60), Expect = 7.9 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 344 PGSPPRLSPTVAADWRRRCYSS 409 PGSPPR +P +A W C S Sbjct: 91 PGSPPRAAPAPSACWSALCRRS 112 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,249,139 Number of Sequences: 37544 Number of extensions: 461344 Number of successful extensions: 1466 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1464 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2279943096 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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