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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0842
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629...    53   3e-07
03_05_0954 - 29113938-29114024,29114277-29114444,29115156-291152...    45   6e-05
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006...    30   2.0  
03_05_1108 - 30458827-30459411,30459523-30459615                       30   2.6  
04_04_1383 - 33144047-33144603,33145554-33147129                       29   6.0  
04_04_0315 - 24331996-24332853                                         29   6.0  
03_05_0744 + 27336697-27337131,27337329-27337787,27340852-273424...    28   7.9  

>08_02_0850 +
           21862110-21862394,21862555-21862723,21862901-21862965,
           21863632-21863905,21863998-21864145,21864237-21864346,
           21864440-21864495,21864568-21864624,21864733-21864876,
           21865304-21865351
          Length = 451

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +2

Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQL-LSDLQAYVKQFHTTGLVW 814
           +V+E     +FY+N+VL ++K KD  HVEW +A  +L +  L+ YVK F+  G VW
Sbjct: 159 HVEESWQMAEFYSNKVLVEYKSKDPDHVEWAKALKELFVPSLRDYVKTFYPLGPVW 214



 Score = 36.7 bits (81), Expect = 0.023
 Identities = 25/101 (24%), Positives = 42/101 (41%)
 Frame = +3

Query: 318 SVNGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQAQSRYIQLAATKAKPSQAEEM 497
           ++  + +LV G +      + +IG +VA    ++  AF      +       KP+     
Sbjct: 44  AILAFDELVAGAVGRVSAAAGKIGAEVAEVTRVLEKAFLVGKDLLVRTKQTQKPTVDSIA 103

Query: 498 QLLTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620
             + P +E I       E  R+S   NHL A + S+ AL W
Sbjct: 104 VFMGPLNETILEANSLAEGTRSSHG-NHLKAAAGSLAALAW 143


>03_05_0954 -
           29113938-29114024,29114277-29114444,29115156-29115212,
           29115314-29115369,29115463-29115572,29116142-29116310,
           29116418-29116742,29117378-29117442,29117541-29117712,
           29118191-29118484
          Length = 500

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
 Frame = +3

Query: 318 SVNGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQ-AQSRYIQLAATKAKPSQAEE 494
           ++  Y + V G +      +++IGG V     ++  AF  ++ R +Q    +   S A+ 
Sbjct: 47  AIVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPASMADA 106

Query: 495 MQLLTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620
                P ++ I+      E  R   +FNH+ ++++S+ AL W
Sbjct: 107 QDFFKPLNDVIAKAIAMTE-GRRPDYFNHIKSVADSLTALAW 147



 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = +2

Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQL-LSDLQAYVKQFHTTGLVW 814
           +V+E     +FY N+VL +++ KD  HVEW +A  +L +  L+ +VK+ +  G  W
Sbjct: 163 HVEESWQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSW 218


>03_06_0476 +
           34199577-34199638,34200267-34200397,34200535-34200698,
           34201007-34201117,34201308-34201387,34201489-34201639,
           34201736-34201829,34202421-34202509,34203672-34203745,
           34203859-34204021,34204445-34204530,34205011-34205094,
           34205186-34205366,34205837-34205887
          Length = 506

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 63  ISLNTIGYFCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLERLP 206
           +S + I   CRF G E+   AA  G  +  E + E +++  S+++RLP
Sbjct: 457 LSEDLITEMCRFGGAEIHPVAAFIGGVASQEVIKELIKQ--SKIDRLP 502


>03_05_1108 - 30458827-30459411,30459523-30459615
          Length = 225

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 21/47 (44%), Positives = 24/47 (51%)
 Frame = -2

Query: 192 IAR*RVPNARSASRDPMPSREQLRCPRLRYQKNDKNIL*CLMRSLTV 52
           +AR RV  ARSA R   PS   L  PRLR   +   I  C +R L V
Sbjct: 36  LARLRV--ARSAGRRAPPSFRSLSPPRLRTSASTATITPCRLRRLRV 80


>04_04_1383 - 33144047-33144603,33145554-33147129
          Length = 710

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 416 RECCFSSAIPLHTTGGNKSQAFPS*GNAAS-DSDQRTDICYPAIS*KESR 562
           REC  S  +  H  G N S A P    AA+ D  QR DI  P  S   SR
Sbjct: 277 RECRGSHLLFFHGPGNNGSAAPPVQSAAATGDGPQRDDISLPDSSTPRSR 326


>04_04_0315 - 24331996-24332853
          Length = 285

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 685 H*PRAQGLEGERQDPRRVVPRLGPTAVRF 771
           H P+A+ ++GERQ PR     L  +A+ F
Sbjct: 55  HIPKAEAVQGERQSPRHGSMELSASALGF 83


>03_05_0744 +
           27336697-27337131,27337329-27337787,27340852-27342418,
           27342641-27343044
          Length = 954

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 344 PGSPPRLSPTVAADWRRRCYSS 409
           PGSPPR +P  +A W   C  S
Sbjct: 91  PGSPPRAAPAPSACWSALCRRS 112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,249,139
Number of Sequences: 37544
Number of extensions: 461344
Number of successful extensions: 1466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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