Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0842
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 84 1e-16
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 81 1e-15
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 64 2e-10
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 9.4
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 9.4
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 83.8 bits (198), Expect = 1e-16
Identities = 48/159 (30%), Positives = 77/159 (48%)
Frame = +3
Query: 144 SDLETLIERLERVTSRLERLPLLRXXXXXXXXXXXXXXVSLNTPPPQESLEPIPSDNMSV 323
S E ++RLE VTSRLE + + S P V
Sbjct: 2 STQEDFLKRLESVTSRLEAIAGQKPALAPKPTNLGGPSASAAASAGDSGEVPA-----HV 56
Query: 324 NGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQAQSRYIQLAATKAKPSQAEEMQL 503
Y D ++ PL + +L+ Q+GGD+A V A F + Y+ AA K++PS E ++
Sbjct: 57 RAYDDAIEEPLANWSKLTDQLGGDLAAVKPKVLAMFASMRNYLWSAAGKSEPSAEEAQKM 116
Query: 504 LTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620
LTP + I +++ R + +NHL++++E++PALGW
Sbjct: 117 LTPVINLLGEINNFKDTKRKTPHWNHLNSVAEALPALGW 155
Score = 75.4 bits (177), Expect = 5e-14
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +2
Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQLLSDLQAYVKQFHTTGLVWS 817
YVKE +A QFY N +L+++KE D HVEW +AW + ++Q +V+Q HTTGLVW+
Sbjct: 165 YVKEFIEAAQFYINPILREFKETDPRHVEWTKAWKAVFEEMQKFVRQVHTTGLVWN 220
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/100 (35%), Positives = 60/100 (60%)
Frame = +3
Query: 321 VNGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQAQSRYIQLAATKAKPSQAEEMQ 500
V Y D ++ PL + +L+ Q+GGD+A V A F + Y+ AA K++PS E +
Sbjct: 817 VRAYDDAIEEPLANWSKLTDQLGGDLAAVKPKVLAMFASMRNYLWSAAGKSEPSAEEAQK 876
Query: 501 LLTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620
+LTP + I +++ R + +NHL++++E++PALGW
Sbjct: 877 MLTPVINLLGEINNFKDTKRKTPHWNHLNSVAEALPALGW 916
Score = 75.4 bits (177), Expect = 5e-14
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +2
Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQLLSDLQAYVKQFHTTGLVWS 817
YVKE +A QFY N +L+++KE D HVEW +AW + ++Q +V+Q HTTGLVW+
Sbjct: 926 YVKEFIEAAQFYINPILREFKETDPRHVEWTKAWKAVFEEMQKFVRQVHTTGLVWN 981
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/108 (26%), Positives = 54/108 (50%)
Frame = +3
Query: 297 PIPSDNMSVNGYQDLVQGPLRAYLQLSQQIGGDVATQANLVNAAFQAQSRYIQLAATKAK 476
P+ + +N Y D + L ++ LS +IGGD+ + + F ++ +A + K
Sbjct: 31 PVDATPQIINLYDDAICENLVSFYDLSAKIGGDLNRLGCMTRSLFFTHRYFLWIACGRKK 90
Query: 477 PSQAEEMQLLTPTSEQISAIQQYREKNRASQFFNHLSAISESIPALGW 620
E L+ S++I A ++EKNR S+F+NH+ + ++ GW
Sbjct: 91 ADNDEFATLVNDLSKEIVAFSDFKEKNRKSEFYNHICGLEAAVGGFGW 138
Score = 59.7 bits (138), Expect = 3e-09
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +2
Query: 650 YVKEMNDAGQFYTNRVLKDWKEKDKTHVEWCRAWVQLLSDLQAYVKQFHTTGLVWS 817
++K+ D FY NR+L + K K+ H EW ++ +L+ L YV+Q HTTGLVW+
Sbjct: 148 FIKDAIDTSVFYLNRILMEHKGKNDFHSEWAKSIKELMLSLHEYVRQHHTTGLVWN 203
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 60 VISLNTIGYFCRFSGNEVEGTAAAHGSA---SDLETLIERLERVTSRLERL 203
++S I YFCRF N+ + A G A SDL+ + LE + LE L
Sbjct: 340 LMSYQKIAYFCRFKRNDEDALRAYQGMALVYSDLDEHSKSLEMFKNLLELL 390
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 87 FCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLER 200
FCR GN A L T IERLE+ L +
Sbjct: 381 FCRCDGNAHLQLELAESQVQHLNTKIERLEKTNDHLNK 418
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 87 FCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLER 200
FCR GN A L T IERLE+ L +
Sbjct: 381 FCRCDGNAHLQLELAESQVQHLNTKIERLEKTNDHLNK 418
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 87 FCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLER 200
FCR GN A L T IERLE+ L +
Sbjct: 381 FCRCDGNAHLQLELAESQVQHLNTKIERLEKTNDHLNK 418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,114,049
Number of Sequences: 27780
Number of extensions: 354849
Number of successful extensions: 1290
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -