Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0842
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.85 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.85 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   1.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   1.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   1.1  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   8.0  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   8.0  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   8.0  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   8.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 748  SAAPLYVGLVFLLPILEHAVSVELAGVIHFLNVRSR 641
            S  P Y  +  +LP++   V++ +A VI  L  RSR
Sbjct: 1603 STVPFYADVKVMLPLIVATVALVVAVVIVALRWRSR 1638


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 748  SAAPLYVGLVFLLPILEHAVSVELAGVIHFLNVRSR 641
            S  P Y  +  +LP++   V++ +A VI  L  RSR
Sbjct: 1599 STVPFYADVKVMLPLIVATVALVVAVVIVALRWRSR 1634


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 102 GNEVEGTAAAH-GSASDLETLIERLERVTSRLER 200
           G  VEG   AH GS+ D +T   R E+VT  L R
Sbjct: 413 GFRVEGIKLAHGGSSKDFKTTRTR-EQVTEALRR 445


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 102 GNEVEGTAAAH-GSASDLETLIERLERVTSRLER 200
           G  VEG   AH GS+ D +T   R E+VT  L R
Sbjct: 328 GFRVEGIKLAHGGSSKDFKTTRTR-EQVTEALRR 360


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 102 GNEVEGTAAAH-GSASDLETLIERLERVTSRLER 200
           G  VEG   AH GS+ D +T   R E+VT  L R
Sbjct: 647 GFRVEGIKLAHGGSSKDFKTTRTR-EQVTEALRR 679


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 100 EKRQKYPIVFNEI---THSYKHFSSTLNRLFSCT 8
           ++ +KY    N +   TH ++H SS  +R  SC+
Sbjct: 194 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCS 227


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 100 EKRQKYPIVFNEI---THSYKHFSSTLNRLFSCT 8
           ++ +KY    N +   TH ++H SS  +R  SC+
Sbjct: 205 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCS 238


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 100 EKRQKYPIVFNEI---THSYKHFSSTLNRLFSCT 8
           ++ +KY    N +   TH ++H SS  +R  SC+
Sbjct: 205 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCS 238


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 100 EKRQKYPIVFNEI---THSYKHFSSTLNRLFSCT 8
           ++ +KY    N +   TH ++H SS  +R  SC+
Sbjct: 194 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCS 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,339
Number of Sequences: 438
Number of extensions: 4253
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)