Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0841
         (818 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   7e-05
UniRef50_A0BU08 Cluster: Chromosome undetermined scaffold_128, w...    34   5.0  
UniRef50_Q97VE3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.0 bits (114), Expect = 7e-05
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 701 FFIAFYLLLIWVDELTAHLVLSGYWSP 781
           F ++ +LLL WVDELTAHLVLSGYWSP
Sbjct: 149 FCLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A0BU08 Cluster: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 638

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 20/85 (23%), Positives = 37/85 (43%)
 Frame = -3

Query: 636 NTQCNNSTECNLRNDLTDKYCSQLRTIXXXXXXXXXXXXXXSPRKFYKARLNATSQRMTS 457
           N QC +  E N RNDL +KY  QL+ +                +   K R+ + S+++  
Sbjct: 106 NIQCRSLQEMNKRNDLQNKYHVQLKLLSEELMQIPKNESLDKLQTEKKQRITSQSKQLQI 165

Query: 456 FVAKIIEELNTLLHIQGSTTHDVIC 382
           F+     +++    I+    H+ +C
Sbjct: 166 FLEHYAYQMSKQSIIRRFFQHEFLC 190


>UniRef50_Q97VE3 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus solfataricus|Rep: Putative uncharacterized
           protein - Sulfolobus solfataricus
          Length = 136

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
 Frame = +3

Query: 36  IALVVVTLIAGAVYSLYYLTVVNS----LYRTMKMSYSES 143
           + L++VTLIA A+ ++YYL +VN+    LY+ +K  Y +S
Sbjct: 11  VFLILVTLIAIAIVTIYYLHIVNANQYGLYQELKNYYIDS 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,058,850
Number of Sequences: 1657284
Number of extensions: 14691847
Number of successful extensions: 35027
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34987
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)