Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0840
(679 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7K0S8 Cluster: LD36566p; n=4; Diptera|Rep: LD36566p - ... 205 9e-52
UniRef50_Q9HC38 Cluster: Glyoxalase domain-containing protein 4;... 168 1e-40
UniRef50_Q09253 Cluster: Putative protein tag-73; n=2; Caenorhab... 152 7e-36
UniRef50_Q4RRM7 Cluster: Chromosome 16 SCAF15002, whole genome s... 130 3e-29
UniRef50_P0AC83 Cluster: Lactoylglutathione lyase; n=79; cellula... 64 2e-09
UniRef50_Q68RJ8 Cluster: Trypanothione-dependent glyoxalase I; n... 63 7e-09
UniRef50_P46235 Cluster: Probable lactoylglutathione lyase; n=68... 60 4e-08
UniRef50_Q9KT93 Cluster: Probable lactoylglutathione lyase; n=8;... 58 3e-07
UniRef50_P0A0T2 Cluster: Lactoylglutathione lyase; n=147; cellul... 58 3e-07
UniRef50_Q8RGE4 Cluster: Lactoylglutathione lyase; n=7; Bacteria... 38 0.30
UniRef50_A5V7T4 Cluster: Lactoylglutathione lyase; n=1; Sphingom... 34 2.8
UniRef50_P50107 Cluster: Lactoylglutathione lyase; n=11; Sacchar... 34 2.8
UniRef50_Q1L2K7 Cluster: ValD; n=2; Streptomyces hygroscopicus|R... 33 4.8
UniRef50_A2U4J5 Cluster: Type III restriction enzyme, res subuni... 33 4.8
UniRef50_A0G1V3 Cluster: Glyoxalase/bleomycin resistance protein... 33 4.8
UniRef50_Q89W49 Cluster: Bll0845 protein; n=6; Proteobacteria|Re... 33 6.4
UniRef50_A6GTQ0 Cluster: Glyoxalase I; n=4; cellular organisms|R... 33 6.4
UniRef50_Q6NA09 Cluster: Possible glyoxalase; n=1; Rhodopseudomo... 33 8.4
UniRef50_A0UVG5 Cluster: Transcriptional regulator, AraC family;... 33 8.4
>UniRef50_Q7K0S8 Cluster: LD36566p; n=4; Diptera|Rep: LD36566p -
Drosophila melanogaster (Fruit fly)
Length = 293
Score = 205 bits (500), Expect = 9e-52
Identities = 97/186 (52%), Positives = 126/186 (67%), Gaps = 4/186 (2%)
Frame = +2
Query: 131 LLNSKM--VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRW 304
L+N+KM +SGRALH+VFK+ DR A F+R+ILGM VLRHEEF EGC+AACNGPY NRW
Sbjct: 1 LINTKMSAISGRALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRW 60
Query: 305 SKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGL 484
SKTMVGYGPE +HFV+ELTYNYGV+ YE GNDF G+T+ S + L RA +++P+ + +G
Sbjct: 61 SKTMVGYGPESSHFVIELTYNYGVSSYEMGNDFGGVTIHSKDILSRAAEHSYPVTQVSGK 120
Query: 485 --KYVEAPGGYKFYIXXXXXXXXXXXXXXXSLASSNLAKSIAYWNGLLTLKLYEKTDKTA 658
+ +P GYKFY+ L SNL S YW+ LL LK+ E+ + +
Sbjct: 121 AGSLLTSPDGYKFYV-IDQASASSDPVQSVELNVSNLQNSRKYWHDLLQLKVLEENEASV 179
Query: 659 LLGYSD 676
L Y +
Sbjct: 180 RLSYGE 185
>UniRef50_Q9HC38 Cluster: Glyoxalase domain-containing protein 4;
n=43; Eumetazoa|Rep: Glyoxalase domain-containing
protein 4 - Homo sapiens (Human)
Length = 313
Score = 168 bits (408), Expect = 1e-40
Identities = 93/196 (47%), Positives = 121/196 (61%), Gaps = 18/196 (9%)
Frame = +2
Query: 146 MVSGRALHFVFKVADRTLTAKFYREILGMKV----LRHEEFSEGCEAACNG--------- 286
M + RALHFVFKV +R TA+FYR++LGMKV + E S A C+
Sbjct: 1 MAARRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSF 60
Query: 287 --PYANRWSKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNW 460
PY +WSKTMVG+GPED HFV ELTYNYGV Y+ GNDF+GIT+ SS+++ A+ W
Sbjct: 61 SKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEW 120
Query: 461 PIKE-HNGLKYVEAPGGYKFYIXXXXXXXXXXXXXXXSLASSNLAKSIAYWNGLLTLKLY 637
P+ E G+ EAPGGYKFY+ +LA S+L KS+ YW LL +K+Y
Sbjct: 121 PLTEVAEGVFETEAPGGYKFYL-QNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIY 179
Query: 638 EKTD--KTALLGYSDD 679
EK + + ALLGY+D+
Sbjct: 180 EKDEEKQRALLGYADN 195
>UniRef50_Q09253 Cluster: Putative protein tag-73; n=2;
Caenorhabditis|Rep: Putative protein tag-73 -
Caenorhabditis elegans
Length = 281
Score = 152 bits (369), Expect = 7e-36
Identities = 75/176 (42%), Positives = 101/176 (57%)
Frame = +2
Query: 149 VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYG 328
++ RALH+VFKVA+R T F+ +L MKVLRHEEF +GCEA CNGPY RWSKTM+GYG
Sbjct: 1 MTARALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYG 60
Query: 329 PEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKYVEAPGG 508
ED HFV+E+TYNY + YE GND+ I + S + ++ + N K G V+ P G
Sbjct: 61 SEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-KSGCGRLAVKDPDG 119
Query: 509 YKFYIXXXXXXXXXXXXXXXSLASSNLAKSIAYWNGLLTLKLYEKTDKTALLGYSD 676
++F I + +L KS YWN L + + E+ + Y D
Sbjct: 120 HEFKI---GKADQSPKVLRVQVNVGDLEKSKKYWNETLGMPIVEEKSSRIRMSYGD 172
>UniRef50_Q4RRM7 Cluster: Chromosome 16 SCAF15002, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 16
SCAF15002, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 335
Score = 130 bits (314), Expect = 3e-29
Identities = 86/217 (39%), Positives = 110/217 (50%), Gaps = 40/217 (18%)
Frame = +2
Query: 146 MVSGRALHFVFKVADRTLTAKFYREILGMKV----LRHEEFSEGCEAACN---------G 286
M RALHFVFK+ DR TA FYR++LGMKV ++ + C+
Sbjct: 1 MALRRALHFVFKIGDRAKTATFYRDVLGMKVGVSKVKFLKEKSTVLRVCHMFVHFLYPCS 60
Query: 287 PYANRWSKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDF--------------------- 403
PY RWSKTMVG+GPED HFVVELTYNYGV Y GNDF
Sbjct: 61 PYDGRWSKTMVGFGPEDDHFVVELTYNYGVGEYTLGNDFRVCKVRLNLLKKVKVLCDCVL 120
Query: 404 ---LGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAPGGYKFYIXXXXXXXXXXXXXXXS 571
GIT+QSS+++ A+ WP+ + L + APGGY FY+
Sbjct: 121 VSLQGITLQSSKAVSNARRLGWPLTQVAEALYLIPAPGGYPFYL-VDKEEPSSDPVQKVC 179
Query: 572 LASSNLAKSIAYWNGLLTLKLYEKTDK--TALLGYSD 676
L S+L +S YW LL +K+ EK ++ T LLG+ D
Sbjct: 180 LGVSDLQRSTHYWTTLLGMKIMEKNEEKNTILLGFDD 216
>UniRef50_P0AC83 Cluster: Lactoylglutathione lyase; n=79; cellular
organisms|Rep: Lactoylglutathione lyase - Shigella
flexneri
Length = 135
Score = 64.5 bits (150), Expect = 2e-09
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Frame = +2
Query: 158 RALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPED 337
R LH + +V D + FY ++LGMK+LR E N Y ++S VGYGPE
Sbjct: 2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSE---------NPEY--KYSLAFVGYGPET 50
Query: 338 THFVVELTYNYGVTHYEQGNDF--LGITV-QSSESLKRAQTNNWPIKEHNG--------L 484
V+ELTYN+GV YE G + + ++V ++E+ ++ + N + G +
Sbjct: 51 EEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVI 110
Query: 485 KYVEAPGGYK 514
+VE P GYK
Sbjct: 111 AFVEDPDGYK 120
>UniRef50_Q68RJ8 Cluster: Trypanothione-dependent glyoxalase I; n=7;
Trypanosomatidae|Rep: Trypanothione-dependent glyoxalase
I - Leishmania major
Length = 141
Score = 62.9 bits (146), Expect = 7e-09
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Frame = +2
Query: 146 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 325
M S R LH + +V D + KFY E LGMKVLR + E ++++ +GY
Sbjct: 1 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPE-----------DKYTLVFLGY 49
Query: 326 GPEDTHFVVELTYNYGVTHYEQGNDF--LGITVQS-SESLKRAQTNNWPI--KEHNG-LK 487
GPE + V+ELTYNYGVT Y+ + + I V+ E + + ++ PI ++ +G +
Sbjct: 50 GPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA 109
Query: 488 YVEAPGGY 511
+V P GY
Sbjct: 110 FVVDPDGY 117
>UniRef50_P46235 Cluster: Probable lactoylglutathione lyase; n=68;
cellular organisms|Rep: Probable lactoylglutathione
lyase - Vibrio parahaemolyticus
Length = 138
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/91 (38%), Positives = 49/91 (53%)
Frame = +2
Query: 146 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 325
M +GR LH + +V D + KFY E++GM++LR E N Y ++ VGY
Sbjct: 1 MSNGRILHTMLRVGDLDKSIKFYTEVMGMQLLRTNE---------NKEY--EYTLAFVGY 49
Query: 326 GPEDTHFVVELTYNYGVTHYEQGNDFLGITV 418
G E V+ELTYN+G T Y+ G F I +
Sbjct: 50 GDESQGAVIELTYNWGKTEYDLGTAFGHIAI 80
>UniRef50_Q9KT93 Cluster: Probable lactoylglutathione lyase; n=8;
Gammaproteobacteria|Rep: Probable lactoylglutathione
lyase - Vibrio cholerae
Length = 138
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = +2
Query: 146 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 325
M + R LH + +V D + +FY +++GM +LR E +E +++ +GY
Sbjct: 1 MSNHRILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTE-----------YKYTLAFLGY 49
Query: 326 GPEDTHFVVELTYNYGVTHYEQGNDFLGITV 418
G E V+ELTYN+GV YE+GN + I +
Sbjct: 50 GDESQGAVIELTYNWGVADYEKGNAYGHIAI 80
>UniRef50_P0A0T2 Cluster: Lactoylglutathione lyase; n=147; cellular
organisms|Rep: Lactoylglutathione lyase - Neisseria
meningitidis serogroup A
Length = 138
Score = 57.6 bits (133), Expect = 3e-07
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Frame = +2
Query: 158 RALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPED 337
R LH + +V + + FY+ +LGMK+LR +++ EG R++ VGYG E
Sbjct: 2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEG-----------RFTLAFVGYGDET 50
Query: 338 THFVVELTYNYGVTHYEQGNDFLGITV------QSSESLKRAQTN----NWPIKEHNG-L 484
V+ELT+N+ Y+ GN + I V ++ E +KR N P+K +
Sbjct: 51 DSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVI 110
Query: 485 KYVEAPGGYK 514
+VE P GYK
Sbjct: 111 AFVEDPDGYK 120
>UniRef50_Q8RGE4 Cluster: Lactoylglutathione lyase; n=7;
Bacteria|Rep: Lactoylglutathione lyase - Fusobacterium
nucleatum subsp. nucleatum
Length = 123
Score = 37.5 bits (83), Expect = 0.30
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +2
Query: 164 LHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPEDTH 343
LH F V D + KFY E LG+KV+R E+F+E +G Y +V G TH
Sbjct: 6 LHENFNVLDLEKSIKFYDEALGLKVVR-EKFAE------DGSY------KIVYLGDGITH 52
Query: 344 FVVELTYNYGVTH-YEQGND--FLGITVQSSESLKRAQTNNWP---IKEHNGLKYVEAPG 505
F +ELT+ T Y+ G++ L V + + + T + E G+ ++ P
Sbjct: 53 FQLELTWLADRTEKYDLGDEEFHLAFEVDNYDEAFKKHTEMGCVVFVNEKMGIYFITDPD 112
Query: 506 GY 511
GY
Sbjct: 113 GY 114
>UniRef50_A5V7T4 Cluster: Lactoylglutathione lyase; n=1;
Sphingomonas wittichii RW1|Rep: Lactoylglutathione lyase
- Sphingomonas wittichii RW1
Length = 163
Score = 34.3 bits (75), Expect = 2.8
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 158 RALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPED 337
R LH + ++ D + +FYR+ +GMK+L +F EA YA +S + +
Sbjct: 30 RLLHSMIRIRDVDASLRFYRDGMGMKLLDRYDF----EA-----YA--FSILFLSFDDYG 78
Query: 338 THFVVELTYNYGVTH-YEQGNDF 403
+ELTYN+GV Y G+ +
Sbjct: 79 DGPAIELTYNWGVEEPYSHGSGY 101
>UniRef50_P50107 Cluster: Lactoylglutathione lyase; n=11;
Saccharomycetales|Rep: Lactoylglutathione lyase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 326
Score = 34.3 bits (75), Expect = 2.8
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +2
Query: 149 VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYG 328
V + H + ++ + T + +FY+ +LGMK+LR E E+A +++ +GYG
Sbjct: 179 VGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEH----ESA-------KFTLYFLGYG 227
Query: 329 -PE-DTHF----VVELTYNYGVT-----HYEQGN 397
P+ D+ F V+ELT+N+G HY GN
Sbjct: 228 VPKTDSVFSCESVLELTHNWGTENDPNFHYHNGN 261
Score = 33.5 bits (73), Expect = 4.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 167 HFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPE--DT 340
H +V D T KFY E GMK+L ++F E + + P+
Sbjct: 25 HTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSA 84
Query: 341 HFVVELTYNYG 373
H V+ELT+N+G
Sbjct: 85 HGVLELTHNWG 95
>UniRef50_Q1L2K7 Cluster: ValD; n=2; Streptomyces hygroscopicus|Rep:
ValD - Streptomyces hygroscopicus subsp. jinggangensis
Length = 451
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 167 HFVFKVADRTLTAKFYREILGMKVLRHEEFS---EGCEAACNGPYANRWSKTMVGYGPED 337
HF VAD +F+ ++LG + L E+ E AA P + ++G GP D
Sbjct: 229 HFARTVADLDSAERFFVDVLGAEPLYRSEYGALPEDVAAALGVPPGGAMRRAVLGMGPTD 288
Query: 338 T 340
T
Sbjct: 289 T 289
>UniRef50_A2U4J5 Cluster: Type III restriction enzyme, res subunit;
n=2; Bacillus|Rep: Type III restriction enzyme, res
subunit - Bacillus coagulans 36D1
Length = 1068
Score = 33.5 bits (73), Expect = 4.8
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +2
Query: 203 AKFYREILGMKVLRH-----EEFSEGCEAACNGPYANRWSKTMVGYGPEDTHFVVELTYN 367
AKFYR+ LG K+ R EE + E NG W+K + Y P++ L +
Sbjct: 808 AKFYRDQLGAKIQRRKQRLSEEAKQKFEELSNGKNIEDWAKEIQYYTPQEAK-QNSLLFE 866
Query: 368 YGVTHYEQGND 400
Y + +Y G D
Sbjct: 867 Y-MENYRTGGD 876
>UniRef50_A0G1V3 Cluster: Glyoxalase/bleomycin resistance
protein/dioxygenase; n=1; Burkholderia phymatum
STM815|Rep: Glyoxalase/bleomycin resistance
protein/dioxygenase - Burkholderia phymatum STM815
Length = 287
Score = 33.5 bits (73), Expect = 4.8
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 131 LLNSKMVSGRAL---HFVFKVADRTLTAKFYREILGMKVLRHEEFS 259
L S SGR L H V D +FYR++LGM+V+R + F+
Sbjct: 51 LQESGAASGRILGINHLVMFTRDMNEGVRFYRDVLGMRVVRTQRFA 96
>UniRef50_Q89W49 Cluster: Bll0845 protein; n=6; Proteobacteria|Rep:
Bll0845 protein - Bradyrhizobium japonicum
Length = 136
Score = 33.1 bits (72), Expect = 6.4
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 167 HFVFKVADRTLTAKFYREILGMKV 238
H V VAD +TA++YR+ILGM+V
Sbjct: 10 HLVINVADVAVTAEWYRKILGMEV 33
>UniRef50_A6GTQ0 Cluster: Glyoxalase I; n=4; cellular organisms|Rep:
Glyoxalase I - Limnobacter sp. MED105
Length = 181
Score = 33.1 bits (72), Expect = 6.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 167 HFVFKVADRTLTAKFYREILGMKVLRHEEFSE 262
H + +V D ++ FY +LGM+VLR +F+E
Sbjct: 26 HSMLRVKDPAISLDFYTRVLGMRVLRKLDFAE 57
>UniRef50_Q6NA09 Cluster: Possible glyoxalase; n=1; Rhodopseudomonas
palustris|Rep: Possible glyoxalase - Rhodopseudomonas
palustris
Length = 267
Score = 32.7 bits (71), Expect = 8.4
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 158 RALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPED 337
R +H + +V D + FY +LGM VL E + N++++T +GY
Sbjct: 139 RLMHTMLRVTDLARSIDFYTRLLGMIVLEQREHKK-----------NQFTQTYLGYAAGF 187
Query: 338 THFVVELTYNYGVTH-YEQGNDFLGITV 418
+ +EL +N+ Y G + I +
Sbjct: 188 SGMTLELVFNWSDDQAYTHGTSYGHIAI 215
>UniRef50_A0UVG5 Cluster: Transcriptional regulator, AraC family;
n=1; Clostridium cellulolyticum H10|Rep: Transcriptional
regulator, AraC family - Clostridium cellulolyticum H10
Length = 779
Score = 32.7 bits (71), Expect = 8.4
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 206 KFYREILGMKVLRHEEFSEGC-EAACNGPYANRWSKTMVGYGPEDTHFVVELTYNYGVTH 382
+FY+ + K + +E++ E C G + + Y P T + +TY+ +
Sbjct: 149 QFYKRYMSFKGIPYEKWYRTITENLCEGGLSEEIGAELYNYTPSGTVGMTIVTYSKPLIS 208
Query: 383 YEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKYVEAPGG 508
Y Q + F+ + + E + + N ++ G+ Y+E G
Sbjct: 209 YGQNDGFVMLVINKKEISELLSSIN---TDNGGVTYIENNDG 247
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,530,354
Number of Sequences: 1657284
Number of extensions: 11194292
Number of successful extensions: 25621
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25601
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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