Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0838
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U50311-1|AAA92307.1| 492|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 3.6
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 29 3.6
L03524-2|AAA28151.1| 488|Caenorhabditis elegans protein-tyrosin... 29 3.6
Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 28 8.3
U28943-10|AAA68362.1| 329|Caenorhabditis elegans Dehydrogenases... 28 8.3
AF068720-6|AAC17784.1| 541|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 58.8 bits (136), Expect = 4e-09
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Frame = +3
Query: 204 LLAWSRQSLQRRPVLTNTVVYATFYTAAELSQQTFNRIYSPEKPDLDVAAAARIVSVGST 383
++ + R+ L P+ T + T + + Q Y + D AR + S
Sbjct: 3 IILFIRRRLATNPLSTQMCIAGTISGSGDCLAQ-----YLSHNQEWDRWRTARFSFLSSC 57
Query: 384 VYAPTLYFWYKFLDKKFAGNAIKAVATKVASDQFIMTPILLATFYTLLGILERR--EDVF 557
AP+L+ W++ L+K N + K+ DQ +P A L +L+ + E +
Sbjct: 58 FMAPSLFIWFRLLEKVKGNNKSLLLVKKLCIDQLCFSPCFNAAILFNLRLLQHQSAEKSW 117
Query: 558 EELKQKYWKTFIANQAFWIPAQTINFYFMPSHLRVVYVASTSFVWINILCFIKRQ 722
+ LK+ ++ + + W Q +N F+P + RV+ +F W L +I ++
Sbjct: 118 DLLKEDWFNIYATSLKVWPFVQVVNLCFVPLNYRVILNQVVAFFWNCYLSYITQK 172
>U50311-1|AAA92307.1| 492|Caenorhabditis elegans Hypothetical
protein C25E10.5 protein.
Length = 492
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = +3
Query: 372 VGSTVYAPTLYFWYKFLDKKFA---GNAIKAVA----TKVASDQFIMTPILLATFYTLLG 530
V V AP++ + LD ++ GN ++VA T V F++TPI T +TLLG
Sbjct: 402 VSIIVSAPSIPMMHTALDTVYSRILGNVDQSVAQGAMTIVDDIVFMVTPIFTTTMFTLLG 461
Query: 531 I 533
+
Sbjct: 462 V 462
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 363 FGRQPRHLNLAFPASKFY*RFAATIQRQYKTLRRLR 256
F Q ++ N ++P+S RF + +Q +Y TL R R
Sbjct: 850 FDAQSQYYNSSYPSSSTDARFLSDLQEEYSTLLRQR 885
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 363 FGRQPRHLNLAFPASKFY*RFAATIQRQYKTLRRLR 256
F Q ++ N ++P+S RF + +Q +Y TL R R
Sbjct: 847 FDAQSQYYNSSYPSSSTDARFLSDLQEEYSTLLRQR 882
>L03524-2|AAA28151.1| 488|Caenorhabditis elegans protein-tyrosine
kinase protein.
Length = 488
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 41 LKKKTKNIRYILLYSL--FIIRKNISNSDTN*PHYTRELSNNL 163
LK + + I+YILL+SL + + S T PH + ++SN L
Sbjct: 3 LKMRYERIKYILLFSLMHLVYSNSTFESFTENPHISSQISNVL 45
>Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical
protein T02D1.3 protein.
Length = 322
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 139 IVWLICVTITNIFSYDKQRI*QN 71
I WL TITN+ SY K ++ +N
Sbjct: 212 IFWLFLCTITNVISYRKMKVLRN 234
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 492 TPILLATFYTLLGILERREDVFEELKQKYWKTFIANQA 605
TP+L T + LE + FEE WK + N++
Sbjct: 31 TPVLFYTMGDMTAQLETAKTGFEETSNVLWKELVTNES 68
>U28943-10|AAA68362.1| 329|Caenorhabditis elegans Dehydrogenases,
short chain protein7 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 189 IMASKLLAWSRQSLQRRPVLTNTVVYATFYTAAELSQQTFNRIYSPE 329
++ +LL RQS+ R VL ++ V+AT + E+S + +I PE
Sbjct: 142 LLIQELLPIVRQSIPSRIVLVSSSVHATCGVSPEMSIEEKLKILCPE 188
>AF068720-6|AAC17784.1| 541|Caenorhabditis elegans Hypothetical
protein K02H11.4 protein.
Length = 541
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 486 IMTPILLATFYTLLGILERREDV---FEELKQKYWKTFIANQAFWIPAQTINFYFMPS 650
+ T I L TF+ L ILE + ++ KQ + F + A +N Y+ P+
Sbjct: 17 VTTTIYLTTFFILPSILENGDQYLQQYDSFKQDVARKFFGDPVTNTDAYIVNTYYYPT 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,306,791
Number of Sequences: 27780
Number of extensions: 359904
Number of successful extensions: 787
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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