Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0836
         (745 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6BFZ9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  

>UniRef50_A6BFZ9 Cluster: Putative uncharacterized protein; n=1;
           Dorea longicatena DSM 13814|Rep: Putative
           uncharacterized protein - Dorea longicatena DSM 13814
          Length = 206

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
 Frame = +3

Query: 72  RTNTRRQNKAE*CYHLERCVQQ*LPTFLEFGSVKSFISETAYKIHTIYNYLM*LFRIFLA 251
           RTN R++     C  L + +     T  E G+V SF S T+     IYNY      IFLA
Sbjct: 8   RTNARKEEIINACEMLYQTMNFKDITIKEIGNVTSF-SRTS-----IYNYFETKEEIFLA 61

Query: 252 LIERQHSLTITSTRELL---RTTNKAAVASVNTISLNNHSDLYK 374
           L++R++   I    +++    + +   +AS    SL+    L K
Sbjct: 62  LLKREYDAWILDLHKIVEEHESMDDEQIASAIAKSLDQRHQLLK 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,839,346
Number of Sequences: 1657284
Number of extensions: 12374901
Number of successful extensions: 22376
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 21865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22376
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)