Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0836
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58754-5|AAB00672.2|  330|Caenorhabditis elegans Serpentine rece...    29   2.6  
AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine re...    29   4.6  

>U58754-5|AAB00672.2|  330|Caenorhabditis elegans Serpentine
           receptor, class sx protein14 protein.
          Length = 330

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 25/81 (30%), Positives = 37/81 (45%)
 Frame = +3

Query: 180 ISETAYKIHTIYNYLM*LFRIFLALIERQHSLTITSTRELLRTTNKAAVASVNTISLNNH 359
           ISE  Y+IH I  Y   LF     L    + + +T  ++ LRT     +  + T  L+  
Sbjct: 2   ISEDTYRIHRIIIYCFVLFLEVFGLFGNINLVVLTIRKKSLRTKYGCILGILAT--LHTL 59

Query: 360 SDLYKPVI*ALSYGFISFYYY 422
             LY+ V  + S    S+YYY
Sbjct: 60  CLLYELVDMSFSVA-ASYYYY 79


>AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein21 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 661 SFWNIEIGILCVALPNTLNQII*YIPR 741
           SFW ++  +LCVA+P  +  I   IP+
Sbjct: 199 SFWIVQFVVLCVAIPGAIVYITLNIPK 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,750,867
Number of Sequences: 27780
Number of extensions: 302505
Number of successful extensions: 525
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)