Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0835
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine re...    29   5.1  
U80837-2|AAB37902.1|  315|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine
           receptor, class z protein20 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 575 KNVHYIFTIPFCFMTKTALIFLIGFYI 495
           K VHY++   F F+TKT + F +  Y+
Sbjct: 158 KRVHYLY---FAFITKTVIFFFVAMYM 181


>U80837-2|AAB37902.1|  315|Caenorhabditis elegans Hypothetical
           protein F07E5.2 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 314 LQQIYGIFIVSVDTVSNSISPLVKFSKQNIKFDFKLLTT 198
           LQQ+  I ++S+  +SN++  +V       +FD ++ TT
Sbjct: 20  LQQMSPIGLISLSVLSNNMKQIVTMPNNKSRFDGRISTT 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,225,562
Number of Sequences: 27780
Number of extensions: 280132
Number of successful extensions: 507
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)