Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0833
         (852 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006D00F1 Cluster: hypothetical protein TTHERM_0082...    35   3.0  
UniRef50_Q8IJQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_UPI00006A0F29 Cluster: Tripartite motif-containing prot...    33   9.1  

>UniRef50_UPI00006D00F1 Cluster: hypothetical protein
           TTHERM_00823840; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00823840 - Tetrahymena
           thermophila SB210
          Length = 386

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +2

Query: 20  ITYLKKNMSKIIVLSKCLRLFLSYIFYIVIDV*REKNIRFFVLITLKLSIDSK*KIYYTY 199
           + Y    + K+IVL+  + LF++++F   + +  +KN+++ V I   LSI      Y  +
Sbjct: 252 VLYSNSTLFKLIVLTGNVLLFITFLFISTVLIKEKKNLKYCVYIFQALSILDLYSFYPLH 311

Query: 200 LVFAYIYIFIVD 235
              +YI   I D
Sbjct: 312 QDLSYIKTSIKD 323


>UniRef50_Q8IJQ9 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2238

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +2

Query: 2    NSKI*IITYLKKNMSKIIVLSKCLRLFLSYIFYIVIDV*REKNIRFFVLITLKLSIDSK* 181
            N+K  + + + KN   II   K LR+ + Y  +    V    +  FF++  +KL I+ K 
Sbjct: 1115 NNKDNVYSKILKNNLSIIKELKNLRMDILYPIFNASLVFLFDDFYFFIIQNIKLVIEEKE 1174

Query: 182  KIYYTYLVF 208
            K YY + +F
Sbjct: 1175 KFYYNHKIF 1183


>UniRef50_UPI00006A0F29 Cluster: Tripartite motif-containing protein
           65.; n=1; Xenopus tropicalis|Rep: Tripartite
           motif-containing protein 65. - Xenopus tropicalis
          Length = 469

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
 Frame = -1

Query: 714 FFQWTFWRIPRSYVQRLCFIFPHL----CTFTDIKQLINHRYYTFKPEET-----LNRQN 562
           F Q   W +P   VQR  F  P L     T T +  L+++R  TF+P        L+RQN
Sbjct: 251 FLQQPLWHLPEPTVQRESFPCPLLPQGATTLTTLLSLLDYRNLTFEPRSANKYIQLSRQN 310

Query: 561 -KTNHTSS 541
            K +H  S
Sbjct: 311 CKASHKMS 318


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,625,083
Number of Sequences: 1657284
Number of extensions: 12889792
Number of successful extensions: 27411
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27385
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)